Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   G3580_RS04160 Genome accession   NZ_CP048836
Coordinates   909834..910226 (-) Length   130 a.a.
NCBI ID   WP_323847994.1    Uniprot ID   A0A6C1AZV8
Organism   Nitrogeniibacter mangrovi strain M9-3-2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 904834..915226
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G3580_RS04145 (G3580_04140) - 906759..908885 (-) 2127 WP_173764068.1 methyl-accepting chemotaxis protein -
  G3580_RS04150 (G3580_04145) - 908942..909454 (-) 513 WP_173764069.1 chemotaxis protein CheW -
  G3580_RS04155 (G3580_04150) - 909459..909824 (-) 366 WP_323847993.1 response regulator transcription factor -
  G3580_RS04160 (G3580_04155) pilG 909834..910226 (-) 393 WP_323847994.1 twitching motility response regulator PilG Regulator
  G3580_RS04165 (G3580_04160) - 910327..910479 (-) 153 WP_173768584.1 rubredoxin -
  G3580_RS04170 (G3580_04165) - 910619..911437 (+) 819 WP_173764070.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  G3580_RS04175 (G3580_04170) thiE 911434..912087 (+) 654 WP_173764071.1 thiamine phosphate synthase -
  G3580_RS04180 (G3580_04175) hemL 912105..913388 (+) 1284 WP_173764072.1 glutamate-1-semialdehyde 2,1-aminomutase -
  G3580_RS04185 (G3580_04180) - 913494..914099 (+) 606 WP_173764073.1 TetR/AcrR family transcriptional regulator -
  G3580_RS04190 (G3580_04185) - 914279..915160 (+) 882 WP_173764074.1 alpha/beta fold hydrolase -

Sequence

Protein


Download         Length: 130 a.a.        Molecular weight: 14296.56 Da        Isoelectric Point: 6.7109

>NTDB_id=423441 G3580_RS04160 WP_323847994.1 909834..910226(-) (pilG) [Nitrogeniibacter mangrovi strain M9-3-2]
MDLTGLKVMVIDDSNTIRRSAEIFLAQAGCQVLLAEDGFDALAKITDHRPDVIFVDIMMPRLDGYQTCALIKKNVRLSAT
PVIMLSSKDGLFDRARGRMVGSDEYLTKPFTKDSLLKAVAAHASTPQSHE

Nucleotide


Download         Length: 393 bp        

>NTDB_id=423441 G3580_RS04160 WP_323847994.1 909834..910226(-) (pilG) [Nitrogeniibacter mangrovi strain M9-3-2]
GTGGATCTGACCGGACTCAAGGTGATGGTGATTGACGACAGCAACACCATCCGACGCAGCGCAGAAATCTTTCTCGCCCA
GGCAGGCTGCCAGGTCTTGCTCGCCGAGGACGGGTTCGACGCGCTGGCGAAAATCACCGACCACCGGCCCGACGTGATCT
TCGTCGACATCATGATGCCGCGCCTGGACGGCTACCAGACCTGCGCCCTGATCAAGAAGAACGTCCGTCTCTCCGCCACC
CCGGTGATCATGCTCTCGTCCAAGGACGGGCTGTTCGACCGGGCACGCGGCCGCATGGTCGGCTCCGACGAGTACCTGAC
CAAGCCGTTCACCAAGGACAGCCTGCTCAAGGCCGTCGCCGCCCACGCCTCCACACCGCAGTCCCACGAGTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(8-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6C1AZV8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

66.667

94.615

0.631
  vicR Streptococcus mutans UA159

40.517

89.231

0.362