Detailed information NTG0423406

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: G4G71_RS20215
• Genome accession: NZ_CP048833
• Coordinates: 4456918..4459128 (-)
• Length: 736 a.a.
• NCBI ID: WP_169942735.1
• Uniprot ID: A0A7Z3GTF1
• Organism: Pseudomonas multiresinivorans strain populi
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4451918..4464128

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G4G71_RS20180 (G4G71_20135)	murB	4452274..4453293 (-)	1020	WP_169939722.1	UDP-N-acetylmuramate dehydrogenase	-
G4G71_RS20185 (G4G71_20140)	-	4453290..4453754 (-)	465	WP_169939723.1	low molecular weight protein-tyrosine-phosphatase	-
G4G71_RS20190 (G4G71_20145)	kdsB	4453754..4454518 (-)	765	WP_065084902.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
G4G71_RS20195 (G4G71_20150)	-	4454523..4454708 (-)	186	WP_009621404.1	Trm112 family protein	-
G4G71_RS20200 (G4G71_20155)	lpxK	4454767..4455765 (-)	999	WP_169939724.1	tetraacyldisaccharide 4'-kinase	-
G4G71_RS20205 (G4G71_20160)	-	4455765..4456214 (-)	450	WP_045211644.1	ExbD/TolR family protein	-
G4G71_RS20210 (G4G71_20165)	exbB	4456211..4456846 (-)	636	WP_017519262.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
G4G71_RS20215 (G4G71_20170)	comA	4456918..4459128 (-)	2211	WP_169942735.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
G4G71_RS20220 (G4G71_20175)	-	4459291..4459821 (+)	531	WP_169939725.1	DUF2062 domain-containing protein	-
G4G71_RS20225 (G4G71_20180)	-	4459970..4461217 (-)	1248	WP_169939726.1	lipoprotein-releasing ABC transporter permease subunit	-
G4G71_RS20230 (G4G71_20185)	lolD	4461229..4461918 (-)	690	WP_024766679.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
G4G71_RS20235 (G4G71_20190)	-	4461911..4463164 (-)	1254	WP_045211653.1	lipoprotein-releasing ABC transporter permease subunit	-
G4G71_RS20240 (G4G71_20195)	-	4463289..4463864 (+)	576	WP_169939727.1	PilZ domain-containing protein	-

Sequence

Protein

• Length: 736 a.a.
• Molecular weight: 79449.76 Da
• Isoelectric Point: 7.9897

>NTDB_id=423406 G4G71_RS20215 WP_169942735.1 4456918..4459128(-) (comA) [Pseudomonas multiresinivorans strain populi]
MFALALGLLALRWLPALPSGWVLLLLALSALPLLFTRGYFIGLFLLGFAWACQSAQWALDDRLTPELDGRTLWLEGRVEG
LPDRSGPSLRFVLSEASSPRAQVPATLRLSWFGGPPVEGGERWRLAVKLKRPHGMANGAGFDYEAWLTAQRIGATGSVKD
GQRLEVSSGPRAWREAWRQRLLAVDAQGRSGALAALVLGDASGLTTADWQVLQDTGTLHLMVISGSHISLLAGLLYAVVA
GLARLGCWPSRLPWLSCACLLAAGGAWAYSLMAGFEVPLQRACVMVSIVLLWRLRYRHRGLWTPLLGALLAVLLAEPLVV
LLPGFWLSYAAVALLIFGFSGRLGRWTAWRTWLRAQWLMAIGLLPASIALGLPLSISGVAANLIAVPWVELVVVPLALLG
SLVLGVPVLGEALLWVSGGLLEWLFRLLGWMAELAPAWQPVAAPAWTLVMAMLGALLLLAPAGLPLRALGLAMFLPVFWP
TIPLPAPGMAEVRVLDVGQGLSVLIRTRSQAWLYDTGARNGDFDIGERVVVPTLRSLGVGRLDLLMLSHADNDHAGGAVA
VKRSLRPAQVISGEPERLAPELQAQPCRIEEWTVDDVHLSSWAWAGARESNDRSCALEIEANGERILLTGDLPQSAELAW
LAAHPDEHVDWLLAGHHGSRSSSGPAFLRAIRPSTAIMSRGANNPYGHPHPSVVERFRALGIRIQDTAERGALVLTLGAH
GELGGVREGAHFWQEN

Nucleotide

• Length: 2211 bp

>NTDB_id=423406 G4G71_RS20215 WP_169942735.1 4456918..4459128(-) (comA) [Pseudomonas multiresinivorans strain populi]
ATGTTCGCTCTGGCCCTGGGGCTGCTGGCGCTGCGCTGGCTGCCGGCGCTTCCATCCGGTTGGGTGCTGCTGCTTCTCGC
GCTGTCCGCGTTACCTCTGTTGTTCACCCGCGGTTATTTCATCGGGCTGTTCCTGCTCGGCTTCGCCTGGGCCTGCCAAT
CGGCGCAGTGGGCGCTGGATGACCGGCTGACGCCAGAGCTGGACGGTCGCACGCTGTGGCTGGAGGGCAGGGTAGAGGGC
TTGCCGGATCGTTCGGGGCCTTCACTGCGCTTCGTGCTCTCCGAGGCTTCGAGCCCTCGCGCGCAGGTTCCGGCAACACT
GCGCCTGTCCTGGTTCGGCGGCCCGCCGGTGGAGGGCGGCGAACGCTGGCGGCTGGCGGTGAAGCTCAAGCGTCCCCATG
GCATGGCCAATGGGGCGGGCTTCGACTACGAGGCCTGGCTCACTGCCCAGCGTATCGGCGCCACCGGCAGCGTAAAGGAT
GGCCAGCGCCTGGAAGTCTCCAGTGGCCCGCGCGCCTGGCGTGAGGCCTGGCGACAACGTTTGCTGGCGGTGGACGCCCA
GGGTCGCTCCGGTGCGCTTGCTGCGCTGGTGCTGGGCGACGCTTCCGGGTTGACCACGGCGGACTGGCAGGTCCTGCAGG
ACACCGGAACCCTGCACCTGATGGTGATTTCCGGTTCGCACATTTCCCTGCTGGCGGGCCTGCTCTACGCCGTCGTGGCG
GGGCTGGCGCGCCTGGGCTGCTGGCCATCCCGTCTGCCCTGGTTGTCCTGCGCCTGCCTGTTGGCTGCCGGCGGCGCCTG
GGCGTATAGCCTGATGGCGGGCTTCGAAGTGCCGTTGCAGCGCGCGTGCGTGATGGTCTCCATCGTCCTGCTGTGGCGCC
TGCGTTATCGCCATCGCGGCCTGTGGACGCCATTGCTCGGCGCCTTGCTGGCAGTACTGCTGGCCGAGCCGCTGGTGGTG
TTGCTGCCGGGGTTCTGGTTGTCCTATGCGGCGGTGGCCTTGCTGATCTTCGGCTTCTCCGGCCGCCTGGGGCGCTGGAC
GGCCTGGCGCACCTGGCTGCGCGCGCAGTGGCTGATGGCGATCGGGCTGTTGCCGGCGTCCATCGCGCTGGGCCTGCCGC
TGAGCATTTCCGGAGTCGCCGCGAACCTGATTGCCGTGCCCTGGGTGGAGCTGGTCGTGGTTCCACTCGCCCTGTTGGGC
AGTCTGGTGCTGGGAGTTCCCGTCCTGGGGGAGGCGCTGCTGTGGGTGTCCGGCGGCCTGCTGGAGTGGCTGTTCCGCCT
GTTGGGCTGGATGGCCGAACTGGCACCCGCCTGGCAGCCGGTGGCGGCGCCGGCCTGGACGCTGGTGATGGCGATGCTTG
GCGCGCTTCTGCTACTGGCGCCGGCCGGCTTGCCATTGCGCGCGTTGGGGCTCGCGATGTTCCTGCCGGTGTTCTGGCCG
ACCATTCCGCTACCCGCGCCGGGCATGGCTGAAGTCCGTGTGCTGGACGTTGGGCAGGGGCTCTCGGTGTTGATCCGTAC
GCGCAGCCAGGCCTGGCTCTACGACACCGGGGCGCGCAACGGTGATTTCGATATCGGCGAGCGAGTGGTGGTGCCGACCT
TGCGCAGTCTCGGCGTTGGCAGGCTCGATCTGCTGATGCTCAGCCATGCGGACAATGACCATGCCGGCGGCGCGGTCGCG
GTGAAGCGTTCGCTCCGGCCTGCGCAGGTCATCAGTGGCGAGCCGGAAAGGCTGGCGCCAGAGCTGCAGGCGCAACCCTG
CCGAATCGAGGAATGGACGGTCGATGACGTTCACCTCTCCAGTTGGGCGTGGGCAGGCGCCAGGGAAAGCAACGACCGCT
CCTGCGCGCTGGAAATCGAAGCCAATGGTGAGCGCATCCTGCTCACTGGCGACCTGCCGCAATCCGCCGAACTGGCTTGG
CTGGCGGCGCATCCGGATGAACACGTCGATTGGTTGCTGGCCGGGCACCACGGCAGCCGCAGCTCCTCCGGGCCGGCCTT
CCTGCGAGCGATCCGACCGTCCACGGCGATCATGTCCCGCGGCGCCAACAACCCCTACGGGCACCCGCATCCGTCGGTCG
TCGAGCGCTTTCGCGCGCTGGGTATCCGGATTCAGGATACGGCGGAGCGGGGCGCGCTGGTCCTGACCCTCGGTGCCCAT
GGCGAGCTTGGGGGAGTGCGGGAAGGCGCACATTTCTGGCAGGAAAATTGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (496-678)

• Competence protein (Competence) (196-459)

• Domain of unknown function (DUF4131) (DUF4131) (17-163)

3D structure

• AlphaFold DB: A0A7Z3GTF1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	57.521	97.554	0.561