Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | G3257_RS05695 | Genome accession | NZ_CP048832 |
| Coordinates | 1269678..1270736 (-) | Length | 352 a.a. |
| NCBI ID | WP_034784937.1 | Uniprot ID | A0A1G8GWI1 |
| Organism | Janthinobacterium lividum strain EIF1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1264678..1275736
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G3257_RS28505 | - | 1264786..1265364 (+) | 579 | WP_244965391.1 | hypothetical protein | - |
| G3257_RS05665 (G3257_05650) | - | 1265361..1265708 (+) | 348 | WP_176374719.1 | antibiotic biosynthesis monooxygenase | - |
| G3257_RS05670 (G3257_05655) | - | 1265705..1266157 (-) | 453 | WP_176374720.1 | hypothetical protein | - |
| G3257_RS05675 (G3257_05660) | - | 1266337..1266603 (+) | 267 | WP_034784922.1 | hypothetical protein | - |
| G3257_RS05680 (G3257_05665) | rpoH | 1266694..1267593 (-) | 900 | WP_170846504.1 | RNA polymerase sigma factor RpoH | - |
| G3257_RS05685 (G3257_05670) | ftsX | 1268009..1268929 (-) | 921 | WP_092612941.1 | permease-like cell division protein FtsX | - |
| G3257_RS05690 (G3257_05675) | - | 1268926..1269669 (-) | 744 | WP_034784934.1 | ATP-binding cassette domain-containing protein | - |
| G3257_RS05695 (G3257_05680) | pilA | 1269678..1270736 (-) | 1059 | WP_034784937.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| G3257_RS05700 (G3257_05685) | - | 1270901..1271881 (-) | 981 | WP_244965392.1 | MerR family transcriptional regulator | - |
| G3257_RS05705 (G3257_05690) | - | 1272047..1273357 (+) | 1311 | WP_176374721.1 | FAD-dependent oxidoreductase | - |
| G3257_RS05710 (G3257_05695) | - | 1273347..1274144 (+) | 798 | WP_176374722.1 | DUF1365 domain-containing protein | - |
| G3257_RS05715 (G3257_05700) | - | 1274219..1275382 (+) | 1164 | WP_176376729.1 | cyclopropane-fatty-acyl-phospholipid synthase family protein | - |
Sequence
Protein
Download Length: 352 a.a. Molecular weight: 37382.66 Da Isoelectric Point: 6.8948
>NTDB_id=423375 G3257_RS05695 WP_034784937.1 1269678..1270736(-) (pilA) [Janthinobacterium lividum strain EIF1]
MFSFFKKKPIAPEAAPAEPLVLPAATPPAPQPAATPLSGAPAELVPVIVAAEPEKKSWMTRLKAGLSKTSNTLSVLFVGA
KIDDALYEELEAALLMSDAGIDATEFLLTELKKRVKEDKLLDAAAVKAALKVLLIDLLSPLEKRFELGRHKPLVMMISGV
NGAGKTTTIGKLAKHMQSNNQSVLLAAGDTFRAAAREQLMVWGERNNVTVISQESGDPAAVAYDSVQSAKARGIDVVMVD
TAGRLPTQLHLMEELKKIKRVIGKGMDGAPHETLLVIDGNTGQNALTQVKAFDDALQLSGLVITKLDGTAKGGVLAAIAR
VRPVPVYFIGIGEKIEDLQPFVAAEFVEALLG
MFSFFKKKPIAPEAAPAEPLVLPAATPPAPQPAATPLSGAPAELVPVIVAAEPEKKSWMTRLKAGLSKTSNTLSVLFVGA
KIDDALYEELEAALLMSDAGIDATEFLLTELKKRVKEDKLLDAAAVKAALKVLLIDLLSPLEKRFELGRHKPLVMMISGV
NGAGKTTTIGKLAKHMQSNNQSVLLAAGDTFRAAAREQLMVWGERNNVTVISQESGDPAAVAYDSVQSAKARGIDVVMVD
TAGRLPTQLHLMEELKKIKRVIGKGMDGAPHETLLVIDGNTGQNALTQVKAFDDALQLSGLVITKLDGTAKGGVLAAIAR
VRPVPVYFIGIGEKIEDLQPFVAAEFVEALLG
Nucleotide
Download Length: 1059 bp
>NTDB_id=423375 G3257_RS05695 WP_034784937.1 1269678..1270736(-) (pilA) [Janthinobacterium lividum strain EIF1]
ATGTTTAGTTTCTTCAAGAAAAAACCCATCGCTCCCGAGGCTGCACCAGCCGAGCCTCTCGTCCTTCCCGCCGCCACGCC
GCCTGCCCCGCAGCCTGCCGCTACGCCCCTGAGCGGTGCGCCGGCCGAGCTCGTGCCCGTGATCGTGGCCGCCGAACCCG
AGAAAAAATCGTGGATGACGCGCCTCAAGGCAGGCCTGTCGAAAACCTCGAACACCCTGTCCGTGCTGTTTGTCGGCGCG
AAGATCGACGACGCCCTGTACGAAGAGCTGGAAGCGGCGCTGCTGATGTCCGACGCCGGCATCGACGCCACGGAATTCCT
GCTGACGGAATTGAAGAAAAGGGTCAAGGAAGACAAGCTGCTCGACGCGGCCGCCGTCAAGGCCGCCCTGAAAGTGCTGC
TGATCGACCTGCTCTCGCCACTGGAAAAGCGCTTCGAGCTGGGCCGCCACAAGCCGCTGGTGATGATGATTTCCGGCGTG
AATGGCGCCGGCAAGACCACCACCATCGGCAAGCTGGCCAAGCACATGCAGTCGAATAACCAGTCCGTGCTGCTGGCCGC
GGGCGACACCTTCCGTGCCGCCGCGCGCGAGCAGTTGATGGTCTGGGGCGAGCGCAACAACGTCACGGTGATTTCGCAGG
AATCGGGCGACCCGGCCGCCGTGGCCTACGACTCCGTGCAATCAGCGAAAGCGCGCGGCATCGACGTGGTCATGGTCGAC
ACGGCAGGCCGCCTGCCGACGCAGTTGCACTTAATGGAAGAATTGAAGAAAATCAAGCGCGTGATCGGCAAGGGCATGGA
TGGCGCACCGCATGAAACCTTGCTCGTCATCGACGGCAACACGGGCCAGAACGCCCTCACGCAAGTGAAGGCCTTCGACG
ATGCTCTGCAGTTGAGCGGCCTGGTGATCACCAAGCTGGACGGCACAGCCAAGGGCGGCGTGCTGGCGGCAATTGCCCGC
GTACGTCCCGTGCCCGTGTATTTCATCGGCATCGGTGAGAAAATTGAAGACTTGCAGCCTTTCGTGGCTGCCGAATTTGT
CGAAGCGCTGCTCGGATAA
ATGTTTAGTTTCTTCAAGAAAAAACCCATCGCTCCCGAGGCTGCACCAGCCGAGCCTCTCGTCCTTCCCGCCGCCACGCC
GCCTGCCCCGCAGCCTGCCGCTACGCCCCTGAGCGGTGCGCCGGCCGAGCTCGTGCCCGTGATCGTGGCCGCCGAACCCG
AGAAAAAATCGTGGATGACGCGCCTCAAGGCAGGCCTGTCGAAAACCTCGAACACCCTGTCCGTGCTGTTTGTCGGCGCG
AAGATCGACGACGCCCTGTACGAAGAGCTGGAAGCGGCGCTGCTGATGTCCGACGCCGGCATCGACGCCACGGAATTCCT
GCTGACGGAATTGAAGAAAAGGGTCAAGGAAGACAAGCTGCTCGACGCGGCCGCCGTCAAGGCCGCCCTGAAAGTGCTGC
TGATCGACCTGCTCTCGCCACTGGAAAAGCGCTTCGAGCTGGGCCGCCACAAGCCGCTGGTGATGATGATTTCCGGCGTG
AATGGCGCCGGCAAGACCACCACCATCGGCAAGCTGGCCAAGCACATGCAGTCGAATAACCAGTCCGTGCTGCTGGCCGC
GGGCGACACCTTCCGTGCCGCCGCGCGCGAGCAGTTGATGGTCTGGGGCGAGCGCAACAACGTCACGGTGATTTCGCAGG
AATCGGGCGACCCGGCCGCCGTGGCCTACGACTCCGTGCAATCAGCGAAAGCGCGCGGCATCGACGTGGTCATGGTCGAC
ACGGCAGGCCGCCTGCCGACGCAGTTGCACTTAATGGAAGAATTGAAGAAAATCAAGCGCGTGATCGGCAAGGGCATGGA
TGGCGCACCGCATGAAACCTTGCTCGTCATCGACGGCAACACGGGCCAGAACGCCCTCACGCAAGTGAAGGCCTTCGACG
ATGCTCTGCAGTTGAGCGGCCTGGTGATCACCAAGCTGGACGGCACAGCCAAGGGCGGCGTGCTGGCGGCAATTGCCCGC
GTACGTCCCGTGCCCGTGTATTTCATCGGCATCGGTGAGAAAATTGAAGACTTGCAGCCTTTCGTGGCTGCCGAATTTGT
CGAAGCGCTGCTCGGATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
55.425 |
96.875 |
0.537 |