Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   BAMOH1_RS08340 Genome accession   NZ_CP061853
Coordinates   1664104..1665372 (+) Length   422 a.a.
NCBI ID   WP_014721183.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain MOH1-5b     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1659104..1670372
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAMOH1_RS08315 (BAMOH1_08315) pyrH 1659899..1660621 (+) 723 WP_003154213.1 UMP kinase -
  BAMOH1_RS08320 (BAMOH1_08320) frr 1660624..1661181 (+) 558 WP_003154212.1 ribosome recycling factor -
  BAMOH1_RS08325 (BAMOH1_08325) - 1661307..1662089 (+) 783 WP_014417783.1 isoprenyl transferase -
  BAMOH1_RS08330 (BAMOH1_08330) - 1662093..1662890 (+) 798 WP_007409796.1 phosphatidate cytidylyltransferase -
  BAMOH1_RS08335 (BAMOH1_08335) dxr 1662946..1664097 (+) 1152 WP_003154208.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  BAMOH1_RS08340 (BAMOH1_08340) eeP 1664104..1665372 (+) 1269 WP_014721183.1 RIP metalloprotease RseP Regulator
  BAMOH1_RS08345 (BAMOH1_08345) proS 1665405..1667099 (+) 1695 WP_014417785.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46504.45 Da        Isoelectric Point: 6.8866

>NTDB_id=423332 BAMOH1_RS08340 WP_014721183.1 1664104..1665372(+) (eeP) [Bacillus amyloliquefaciens strain MOH1-5b]
MFVNTVIAFIIIFGTLVFFHELGHLLLAQRAGILCREFAIGFGPKIFSFKKNETVYTIRLLPVGGFVRMAGEDPEMIEVK
PGYTVGLLFNKDDEVEKVIINQKEKYPDALIIEVETADLEHEMKITGYEQGKEDELAGFTVSQTSFFIVDGEEVQIAPYN
RQFGSKPVWKRIKAIAAGPIMNFILAYVILVMLGFIQGVPSNQPELGKLTDNGRAAAAGLKEGDYIQSINGEKMRSWTDI
VTAVKENPGKKIDVAVKRDGKSFHISVTPEAVKDENKKTIGRFGSYAPTEKGALAAIAYGATSTVDVTKAILTNLGKIVT
GQFKLDMLSGPVGIYDMTDQVAKTGIINLLRFAAFLSINLGIVNLLPIPALDGGRLLFLFIEAIRGKPINRDKEAFVVFI
GVAFLMLLMLVVTWNDIQRLFL

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=423332 BAMOH1_RS08340 WP_014721183.1 1664104..1665372(+) (eeP) [Bacillus amyloliquefaciens strain MOH1-5b]
ATGTTCGTGAATACAGTTATCGCGTTTATTATTATTTTCGGAACGCTCGTTTTTTTCCATGAGCTCGGGCATTTATTGCT
CGCCCAAAGAGCGGGAATCCTTTGCCGTGAATTTGCGATCGGCTTCGGCCCTAAAATCTTTTCATTTAAAAAGAATGAAA
CCGTGTATACGATCAGACTCCTTCCGGTCGGCGGGTTCGTCCGTATGGCCGGTGAAGACCCGGAGATGATCGAAGTCAAA
CCCGGTTATACCGTCGGGCTTCTTTTTAATAAAGATGACGAAGTGGAAAAAGTCATCATTAATCAAAAGGAAAAATATCC
TGACGCTTTAATTATCGAGGTGGAGACGGCTGATCTTGAGCACGAAATGAAGATTACCGGGTACGAGCAGGGGAAAGAAG
ATGAACTGGCGGGCTTTACTGTCAGTCAGACCTCTTTTTTTATCGTAGACGGAGAAGAAGTGCAGATTGCGCCTTACAAT
CGACAATTCGGGTCTAAACCCGTATGGAAGCGGATTAAGGCGATTGCTGCCGGTCCGATAATGAACTTCATCTTAGCGTA
TGTCATTCTCGTCATGCTTGGATTCATTCAAGGCGTGCCTTCGAATCAGCCTGAGCTCGGGAAGCTGACAGACAATGGAC
GCGCAGCGGCTGCCGGTCTAAAAGAAGGCGACTATATCCAGAGCATTAACGGTGAAAAAATGAGGTCATGGACCGACATC
GTGACAGCGGTAAAAGAAAATCCCGGGAAAAAAATCGATGTCGCCGTCAAACGGGACGGCAAATCGTTTCATATCTCGGT
TACACCTGAAGCTGTAAAAGATGAAAATAAAAAAACAATCGGCCGCTTCGGCTCTTATGCGCCGACTGAAAAAGGCGCGC
TTGCAGCGATCGCCTACGGCGCGACATCTACCGTTGATGTCACAAAAGCGATTCTGACCAATCTGGGCAAAATTGTGACA
GGCCAGTTTAAGCTTGATATGCTTTCGGGTCCTGTCGGCATTTATGATATGACGGATCAAGTTGCAAAAACCGGCATCAT
CAACTTATTGCGGTTTGCGGCGTTTTTAAGCATCAACCTGGGAATCGTCAACCTGCTGCCGATACCGGCGCTTGACGGCG
GACGGCTGCTGTTTTTATTCATTGAAGCGATCCGCGGCAAGCCGATTAACCGCGACAAGGAAGCATTTGTCGTATTTATC
GGCGTAGCTTTCTTAATGCTTCTTATGCTGGTTGTCACATGGAACGATATCCAGCGTTTATTCTTATAA

Domains

Predicted by InterProScan.

PDZ domain (PDZ_6)

(212-258)

Peptidase family M50 (Peptidase_M50)

(8-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

39.535

100

0.403
  eeP Streptococcus thermophilus LMG 18311

39.671

100

0.4

Multiple sequence alignment