Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | G3R47_RS08645 | Genome accession | NZ_CP048827 |
| Coordinates | 1791219..1791599 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain ABF9692 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1786219..1796599
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G3R47_RS08615 (G3R47_08605) | kdsB | 1787122..1787883 (+) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| G3R47_RS08620 (G3R47_08610) | - | 1787895..1788875 (+) | 981 | WP_038346636.1 | DNA polymerase III subunit delta' | - |
| G3R47_RS08625 (G3R47_08615) | - | 1788887..1789228 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| G3R47_RS08630 (G3R47_08620) | - | 1789246..1790019 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| G3R47_RS08635 (G3R47_08625) | - | 1790057..1790665 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| G3R47_RS08640 (G3R47_08630) | - | 1790675..1791229 (+) | 555 | WP_000841373.1 | type II secretion system protein | - |
| G3R47_RS08645 (G3R47_08635) | xcpV | 1791219..1791599 (+) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| G3R47_RS08650 (G3R47_08640) | xcpW | 1791599..1792300 (+) | 702 | WP_020753089.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| G3R47_RS08655 (G3R47_08645) | gspK | 1792300..1793259 (+) | 960 | WP_001218621.1 | type II secretion system minor pseudopilin GspK | - |
| G3R47_RS08660 (G3R47_08650) | - | 1793489..1794085 (+) | 597 | WP_000908453.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| G3R47_RS08665 (G3R47_08655) | ung | 1794136..1794849 (+) | 714 | WP_001177527.1 | uracil-DNA glycosylase | - |
| G3R47_RS08670 (G3R47_08660) | - | 1794846..1795970 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| G3R47_RS08675 (G3R47_08665) | tadA | 1795977..1796480 (+) | 504 | WP_000033177.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=423325 G3R47_RS08645 WP_000836911.1 1791219..1791599(+) (xcpV) [Acinetobacter baumannii strain ABF9692]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=423325 G3R47_RS08645 WP_000836911.1 1791219..1791599(+) (xcpV) [Acinetobacter baumannii strain ABF9692]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGGACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGGACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |