Detailed information NTG0423326

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: G3R47_RS08650
• Genome accession: NZ_CP048827
• Coordinates: 1791599..1792300 (+)
• Length: 233 a.a.
• NCBI ID: WP_020753089.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain ABF9692
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1786599..1797300

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G3R47_RS08615 (G3R47_08605)	kdsB	1787122..1787883 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
G3R47_RS08620 (G3R47_08610)	-	1787895..1788875 (+)	981	WP_038346636.1	DNA polymerase III subunit delta'	-
G3R47_RS08625 (G3R47_08615)	-	1788887..1789228 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
G3R47_RS08630 (G3R47_08620)	-	1789246..1790019 (+)	774	WP_000497298.1	TatD family hydrolase	-
G3R47_RS08635 (G3R47_08625)	-	1790057..1790665 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
G3R47_RS08640 (G3R47_08630)	-	1790675..1791229 (+)	555	WP_000841373.1	type II secretion system protein	-
G3R47_RS08645 (G3R47_08635)	xcpV	1791219..1791599 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
G3R47_RS08650 (G3R47_08640)	xcpW	1791599..1792300 (+)	702	WP_020753089.1	type II secretion system minor pseudopilin GspJ	Machinery gene
G3R47_RS08655 (G3R47_08645)	gspK	1792300..1793259 (+)	960	WP_001218621.1	type II secretion system minor pseudopilin GspK	-
G3R47_RS08660 (G3R47_08650)	-	1793489..1794085 (+)	597	WP_000908453.1	6-pyruvoyl trahydropterin synthase family protein	-
G3R47_RS08665 (G3R47_08655)	ung	1794136..1794849 (+)	714	WP_001177527.1	uracil-DNA glycosylase	-
G3R47_RS08670 (G3R47_08660)	-	1794846..1795970 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
G3R47_RS08675 (G3R47_08665)	tadA	1795977..1796480 (+)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
G3R47_RS08680 (G3R47_08670)	-	1796550..1796993 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26599.56 Da
• Isoelectric Point: 9.5501

>NTDB_id=423326 G3R47_RS08650 WP_020753089.1 1791599..1792300(+) (xcpW) [Acinetobacter baumannii strain ABF9692]
MIKNKYIHIRSFAARLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQDGNS

Nucleotide

• Length: 702 bp

>NTDB_id=423326 G3R47_RS08650 WP_020753089.1 1791599..1792300(+) (xcpW) [Acinetobacter baumannii strain ABF9692]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTGCTGCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGACGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	98.712	100	0.987