Detailed information NTG0422863

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: G3T50_RS05765
• Genome accession: NZ_CP048771
• Coordinates: 1097351..1098310 (+)
• Length: 319 a.a.
• NCBI ID: WP_167842843.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain ZS007
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1092351..1103310

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G3T50_RS05745 (G3T50_05725)	-	1092910..1094109 (-)	1200	WP_052817118.1	glycosyltransferase family 8 protein	-
G3T50_RS05750 (G3T50_05730)	-	1094102..1095253 (-)	1152	WP_032591573.1	glycosyltransferase family 8 protein	-
G3T50_RS05755 (G3T50_05735)	-	1095266..1096414 (-)	1149	WP_079460899.1	FkbM family methyltransferase	-
G3T50_RS05760 (G3T50_05740)	-	1096477..1097292 (-)	816	WP_167842842.1	glycosyltransferase family 2 protein	-
G3T50_RS05765 (G3T50_05745)	waaF	1097351..1098310 (+)	960	WP_167842843.1	glycosyltransferase family 9 protein	Regulator
G3T50_RS05770 (G3T50_05750)	gmhA	1098291..1098851 (-)	561	WP_002868599.1	D-sedoheptulose 7-phosphate isomerase	-
G3T50_RS05775 (G3T50_05755)	rfaE1	1098848..1100233 (-)	1386	WP_087691939.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
G3T50_RS05780 (G3T50_05760)	rfaD	1100226..1101179 (-)	954	WP_002868597.1	ADP-glyceromanno-heptose 6-epimerase	-
G3T50_RS05785 (G3T50_05765)	gmhB	1101180..1101741 (-)	562	Protein_1126	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
G3T50_RS05790 (G3T50_05770)	-	1101822..1102124 (+)	303	WP_002852762.1	cytochrome c	-
G3T50_RS05795 (G3T50_05775)	ccoS	1102147..1102353 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36921.62 Da
• Isoelectric Point: 10.4008

>NTDB_id=422863 G3T50_RS05765 WP_167842843.1 1097351..1098310(+) (waaF) [Campylobacter jejuni strain ZS007]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILRILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLDIKAHSKDLKLPFRLKFQNPIVLKNGKKILGLNPGA
SFGSAKRWDASYFAQVALNFSKTHEILIFGAGKAEQELCDEIFHILKEKNVKVKNLCNKTTIKMLCQNIIFCDIFITNDS
GPMHLSAVYKVKTVVIFGPTKFTQTSPWQNQNARWVHLDLACMPCMQKICPLKHHKCMKDLKPQRVIEEARNLLKNPHL

Nucleotide

• Length: 960 bp

>NTDB_id=422863 G3T50_RS05765 WP_167842843.1 1097351..1098310(+) (waaF) [Campylobacter jejuni strain ZS007]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCTCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACGTATTCTTAAAACAAAGCAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTAGATATCAAAGCTCATTCTAAGGATTTAA
AACTCCCTTTTAGATTAAAATTTCAAAATCCTATTGTTTTAAAAAATGGCAAAAAAATCCTAGGCTTAAATCCTGGAGCA
AGTTTTGGAAGTGCTAAAAGATGGGATGCGAGTTATTTTGCACAAGTTGCTTTAAATTTTAGCAAAACTCATGAAATTTT
GATTTTTGGAGCGGGCAAGGCAGAACAAGAACTTTGCGATGAAATTTTTCATATATTAAAAGAAAAAAATGTCAAGGTAA
AAAATCTTTGCAATAAAACCACCATCAAAATGCTTTGTCAAAATATCATTTTTTGTGATATCTTCATCACAAATGATAGT
GGCCCTATGCACCTAAGTGCAGTTTATAAGGTAAAAACCGTAGTTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAATGCAAGATGGGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAATCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTCAAAGGGTTATAGAAGAAGCTAGAAATTTACTTAAAAACCCTCATCTATAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (98-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	88.715	100	0.887