Detailed information    

insolico Bioinformatically predicted

Overview

Name   CJE0566   Type   Regulator
Locus tag   G3R55_RS02825 Genome accession   NZ_CP048769
Coordinates   534767..535417 (-) Length   216 a.a.
NCBI ID   WP_087695858.1    Uniprot ID   A0AAE8G745
Organism   Campylobacter jejuni strain ZJB020     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 529767..540417
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G3R55_RS02790 (G3R55_02800) - 530156..531160 (+) 1005 WP_079460914.1 hypothetical protein -
  G3R55_RS02795 (G3R55_02805) tlyA 531157..531918 (+) 762 WP_167861627.1 TlyA family RNA methyltransferase -
  G3R55_RS02800 (G3R55_02810) ribF 531884..532738 (+) 855 WP_167861628.1 bifunctional riboflavin kinase/FAD synthetase -
  G3R55_RS02805 (G3R55_02815) cmoA 532725..533435 (+) 711 WP_167861629.1 carboxy-S-adenosyl-L-methionine synthase CmoA -
  G3R55_RS02810 (G3R55_02820) - 533425..533640 (-) 216 WP_058000785.1 EexN family lipoprotein -
  G3R55_RS02815 (G3R55_02825) - 533637..534065 (-) 429 WP_044261251.1 EexN family lipoprotein -
  G3R55_RS02820 (G3R55_02830) - 534124..534756 (-) 633 WP_167861630.1 trimeric intracellular cation channel family protein -
  G3R55_RS02825 (G3R55_02835) CJE0566 534767..535417 (-) 651 WP_087695858.1 DNA/RNA non-specific endonuclease Regulator
  G3R55_RS02830 (G3R55_02840) nth 535414..536040 (-) 627 WP_144689718.1 endonuclease III -
  G3R55_RS02835 (G3R55_02845) peb4 536121..536942 (+) 822 WP_167861631.1 peptidylprolyl isomerase PEB4 -
  G3R55_RS02840 (G3R55_02850) fbaA 536942..538006 (+) 1065 WP_167861632.1 class II fructose-bisphosphate aldolase -
  G3R55_RS02845 (G3R55_02855) - 538101..539543 (+) 1443 WP_002852205.1 MotA/TolQ/ExbB proton channel family protein -

Sequence

Protein


Download         Length: 216 a.a.        Molecular weight: 25439.16 Da        Isoelectric Point: 9.5471

>NTDB_id=422829 G3R55_RS02825 WP_087695858.1 534767..535417(-) (CJE0566) [Campylobacter jejuni strain ZJB020]
MKIFIFLLVISLNIFALEPYKPSADFSSYFNNINCSQILDKFFYLNCYDYKLKGTKAVAYKVEALNLKDKQIKKRPRFED
DANIPKKYRTTWSDYKNSGYTRGHTAPNASFSFSKAAQNSVFLMSNITPQNAQINNKIWNEIEQRERNLALEFQSIEVLN
LVLYDKEPQYIKNRIAIPSFYVKIIKTPKFKECYQAPNHEVNDENIKQYQINCDKF

Nucleotide


Download         Length: 651 bp        

>NTDB_id=422829 G3R55_RS02825 WP_087695858.1 534767..535417(-) (CJE0566) [Campylobacter jejuni strain ZJB020]
ATGAAAATTTTCATCTTTTTACTCGTTATATCTCTTAATATTTTCGCCTTAGAACCTTACAAGCCTAGTGCTGATTTTTC
TTCTTATTTTAACAATATAAATTGCTCGCAAATCTTAGATAAGTTTTTTTATCTAAATTGCTATGATTACAAACTCAAAG
GTACAAAAGCTGTTGCTTATAAAGTAGAAGCTTTAAATTTAAAAGATAAGCAAATTAAAAAACGTCCACGCTTTGAAGAT
GATGCAAATATTCCTAAAAAATACCGCACTACTTGGAGTGATTATAAAAACAGTGGTTACACACGAGGACACACTGCACC
CAATGCTTCTTTTAGCTTTAGTAAAGCTGCTCAAAATTCAGTATTTTTAATGAGTAATATTACCCCACAAAATGCACAAA
TAAATAATAAAATTTGGAATGAAATCGAACAAAGAGAAAGAAATTTAGCTTTAGAATTTCAAAGTATCGAAGTTTTAAAT
TTAGTACTTTACGATAAAGAACCACAATACATTAAAAACCGTATTGCTATACCAAGTTTTTATGTGAAAATTATTAAAAC
TCCGAAATTTAAAGAATGCTATCAAGCACCAAACCACGAAGTAAATGATGAAAATATTAAACAGTATCAAATAAATTGTG
ATAAATTTTAA

Domains

Predicted by InterproScan.

DNA/RNA non-specific endonuclease (Endonuclease_NS)

(34-215)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE0566 Campylobacter jejuni RM1221

69.543

91.204

0.634
  CJE1441 Campylobacter jejuni RM1221

69.036

91.204

0.63

Multiple sequence alignment