Detailed information    

insolico Bioinformatically predicted

Overview

Name   CJE0566   Type   Regulator
Locus tag   G3T45_RS03105 Genome accession   NZ_CP048764
Coordinates   574005..574655 (-) Length   216 a.a.
NCBI ID   WP_002852117.1    Uniprot ID   Q0PAS3
Organism   Campylobacter jejuni strain ZH003     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 569005..579655
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G3T45_RS03070 (G3T45_03065) - 569383..570387 (+) 1005 WP_079263945.1 hypothetical protein -
  G3T45_RS03075 (G3T45_03070) tlyA 570384..571145 (+) 762 WP_002872582.1 TlyA family RNA methyltransferase -
  G3T45_RS03080 (G3T45_03075) ribF 571111..571965 (+) 855 WP_044261254.1 bifunctional riboflavin kinase/FAD synthetase -
  G3T45_RS03085 (G3T45_03080) cmoA 571952..572662 (+) 711 WP_079261555.1 carboxy-S-adenosyl-L-methionine synthase CmoA -
  G3T45_RS03090 (G3T45_03085) - 572652..572873 (-) 222 WP_002859102.1 EexN family lipoprotein -
  G3T45_RS03095 (G3T45_03090) - 572870..573304 (-) 435 WP_052781974.1 EexN family lipoprotein -
  G3T45_RS03100 (G3T45_03095) - 573362..573994 (-) 633 WP_002852232.1 trimeric intracellular cation channel family protein -
  G3T45_RS03105 (G3T45_03100) CJE0566 574005..574655 (-) 651 WP_002852117.1 DNA/RNA non-specific endonuclease Regulator
  G3T45_RS03110 (G3T45_03105) nth 574652..575278 (-) 627 WP_144689718.1 endonuclease III -
  G3T45_RS03115 (G3T45_03110) peb4 575359..576180 (+) 822 WP_167843414.1 peptidylprolyl isomerase PEB4 -
  G3T45_RS03120 (G3T45_03115) fbaA 576180..577244 (+) 1065 WP_167843415.1 class II fructose-bisphosphate aldolase -
  G3T45_RS03125 (G3T45_03120) - 577339..578781 (+) 1443 WP_002852205.1 MotA/TolQ/ExbB proton channel family protein -

Sequence

Protein


Download         Length: 216 a.a.        Molecular weight: 25472.10 Da        Isoelectric Point: 9.6573

>NTDB_id=422749 G3T45_RS03105 WP_002852117.1 574005..574655(-) (CJE0566) [Campylobacter jejuni strain ZH003]
MKIFIFLLTISLNIFALEPYKPSADFSSYFNNINCSQILDKFFYLNCYDYKLKGTKAVAYKVEASNLKDRQIKKRPRFED
DTNIPKKYRTTWSNYKNSGYTRGHTAPNASFSFSKAAQNSVFLMSNITPQNAQINNKIWNEIEQRERNLALEFQSIEVLN
LVLYDKEPQYIKNRIAIPSFYVKIIKTPKFKECYQAPNHEVNDENIKQYQINCDKF

Nucleotide


Download         Length: 651 bp        

>NTDB_id=422749 G3T45_RS03105 WP_002852117.1 574005..574655(-) (CJE0566) [Campylobacter jejuni strain ZH003]
ATGAAAATTTTCATCTTTTTACTCACTATATCTCTTAATATTTTTGCCTTAGAACCTTACAAGCCTAGTGCTGATTTTTC
TTCTTATTTTAACAATATAAATTGCTCGCAAATCTTAGATAAGTTTTTTTATCTAAATTGCTATGATTATAAACTCAAAG
GCACAAAAGCTGTTGCTTATAAGGTAGAAGCTTCAAATTTGAAAGATAGACAAATCAAAAAACGCCCTCGCTTTGAAGAT
GATACAAATATTCCTAAAAAATACCGCACTACTTGGAGTAATTATAAAAACAGTGGTTACACACGAGGACACACTGCACC
CAATGCTTCTTTTAGCTTTAGTAAAGCTGCTCAAAATTCAGTATTTTTAATGAGTAATATTACCCCACAAAATGCACAAA
TAAATAATAAAATTTGGAATGAAATCGAACAAAGAGAAAGAAATTTAGCTTTAGAATTTCAAAGTATCGAAGTTTTAAAT
TTAGTACTTTACGATAAAGAACCACAATACATTAAAAACCGTATTGCTATACCAAGTTTTTATGTGAAAATTATTAAAAC
TCCGAAATTTAAAGAATGCTATCAAGCACCAAACCACGAAGTAAATGATGAAAATATTAAACAGTATCAAATAAATTGTG
ATAAATTTTAA

Domains

Predicted by InterproScan.

DNA/RNA non-specific endonuclease (Endonuclease_NS)

(34-215)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q0PAS3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE0566 Campylobacter jejuni RM1221

69.543

91.204

0.634
  CJE1441 Campylobacter jejuni RM1221

69.036

91.204

0.63

Multiple sequence alignment