Detailed information NTG0422541

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: G3G87_RS07835
• Genome accession: NZ_CP048714
• Coordinates: 1593601..1594575 (+)
• Length: 324 a.a.
• NCBI ID: WP_002478129.1
• Uniprot ID: -
• Organism: Staphylococcus lugdunensis strain CGMH-SL36
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1588601..1599575

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G3G87_RS07800	rpmG	1589025..1589174 (+)	150	WP_001830957.1	50S ribosomal protein L33	-
G3G87_RS07805	-	1589424..1589960 (+)	537	WP_002459008.1	5-formyltetrahydrofolate cyclo-ligase	-
G3G87_RS07810	-	1589977..1591434 (+)	1458	WP_228865257.1	rhomboid family intramembrane serine protease	-
G3G87_RS07815	-	1591418..1591621 (+)	204	WP_002459010.1	YqgQ family protein	-
G3G87_RS07820	-	1591618..1592604 (+)	987	WP_002478128.1	ROK family glucokinase	-
G3G87_RS07825	-	1592604..1592927 (+)	324	WP_002459012.1	MTH1187 family thiamine-binding protein	-
G3G87_RS07830	-	1592931..1593554 (+)	624	WP_002459013.1	MBL fold metallo-hydrolase	-
G3G87_RS07835	comGA	1593601..1594575 (+)	975	WP_002478129.1	competence type IV pilus ATPase ComGA	Machinery gene
G3G87_RS07840	comGB	1594547..1595611 (+)	1065	WP_002478130.1	competence type IV pilus assembly protein ComGB	-
G3G87_RS07845	comGC	1595626..1595940 (+)	315	WP_002459016.1	competence type IV pilus major pilin ComGC	Machinery gene
G3G87_RS07850	comGD	1595918..1596367 (+)	450	WP_037540764.1	competence type IV pilus minor pilin ComGD	-
G3G87_RS07855	-	1596354..1596647 (+)	294	WP_002478131.1	hypothetical protein	-
G3G87_RS07860	-	1596709..1597068 (+)	360	WP_002478132.1	competence type IV pilus minor pilin ComGF	-
G3G87_RS07865	-	1597222..1597740 (+)	519	WP_002459021.1	shikimate kinase	-
G3G87_RS07870	gcvT	1597910..1599001 (+)	1092	WP_002478133.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 36932.76 Da
• Isoelectric Point: 7.8896

>NTDB_id=422541 G3G87_RS07835 WP_002478129.1 1593601..1594575(+) (comGA) [Staphylococcus lugdunensis strain CGMH-SL36]
MKILFKEIVNKAIQQNASDIHFIPSQTTVIIKFRVNDQLVDYEELNLSIYTKLLTFMKFQAGLDVSTHQIAQSGRYTYQY
KQQYYLRISTLPLSLGTESCVIRIVPQYFQQHKTCYQFNDFKQFMNKKQGLLLFSGPTGSGKSTLMYQMVLYAQQELNLN
VITIEDPVEQLISGITQVSVNDKAGINYVSTFKAILRCDPDVILIGEIRDASIAKCVIQASLSGHLVLSTIHANNCKGTL
LRLLEMGISVQEICQSINLISNQRLITTLNQQRALVCEMMINHQIEYFFEHNHTLPKSFHHLSQLIGNMSKEGVICEETA
NKYT

Nucleotide

• Length: 975 bp

>NTDB_id=422541 G3G87_RS07835 WP_002478129.1 1593601..1594575(+) (comGA) [Staphylococcus lugdunensis strain CGMH-SL36]
ATGAAAATATTATTTAAGGAAATTGTTAACAAAGCGATACAACAGAATGCAAGTGATATTCACTTTATTCCAAGTCAAAC
TACTGTCATCATTAAATTTCGTGTTAATGACCAACTTGTAGATTATGAAGAATTAAATTTAAGCATCTATACTAAACTGT
TAACGTTTATGAAATTTCAAGCTGGCTTAGATGTATCAACACATCAAATCGCCCAAAGTGGAAGATATACCTATCAATAT
AAGCAACAATATTACTTAAGAATCTCAACTTTACCACTATCATTAGGTACAGAAAGTTGCGTCATTCGTATCGTACCACA
ATACTTTCAACAACATAAAACGTGTTACCAATTTAATGATTTCAAACAGTTTATGAATAAAAAGCAAGGATTGTTATTAT
TTAGTGGTCCAACTGGATCTGGTAAAAGTACACTGATGTATCAAATGGTTTTATATGCACAACAAGAGCTTAATTTAAAT
GTTATTACAATTGAAGATCCAGTTGAACAGTTGATATCAGGCATTACACAAGTATCTGTAAATGATAAAGCAGGCATTAA
TTATGTATCAACATTTAAAGCTATTCTGCGCTGTGATCCTGATGTTATCTTAATTGGCGAAATTAGAGATGCCAGTATCG
CAAAATGTGTTATTCAGGCAAGTTTAAGTGGCCATTTAGTATTATCTACAATTCACGCAAACAACTGCAAAGGAACTTTA
TTAAGATTATTAGAAATGGGAATTTCAGTTCAAGAAATATGTCAATCAATTAATTTAATCTCTAATCAAAGACTCATTAC
CACCCTAAATCAACAACGAGCATTGGTTTGCGAAATGATGATAAATCATCAAATAGAATACTTTTTTGAACATAATCATA
CCTTGCCTAAATCATTTCATCATTTATCACAGTTAATTGGTAACATGTCAAAAGAAGGGGTCATTTGTGAAGAAACTGCT
AATAAATATACTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (8-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	71.207	99.691	0.71
comGA	Staphylococcus aureus N315	71.207	99.691	0.71