Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | G3U99_RS06650 | Genome accession | NZ_CP048693 |
| Coordinates | 1372906..1373511 (-) | Length | 201 a.a. |
| NCBI ID | WP_006958122.1 | Uniprot ID | A0A2A2CS00 |
| Organism | Vibrio coralliilyticus OCN008 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1367906..1378511
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G3U99_RS06640 (G3U99_06615) | aceF | 1369197..1371101 (+) | 1905 | WP_021457057.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
| G3U99_RS06645 (G3U99_06620) | lpdA | 1371357..1372787 (+) | 1431 | WP_006958123.1 | dihydrolipoyl dehydrogenase | - |
| G3U99_RS06650 (G3U99_06625) | opaR | 1372906..1373511 (-) | 606 | WP_006958122.1 | LuxR/HapR/OpaR family quorum-sensing transcriptional regulator | Regulator |
| G3U99_RS06655 (G3U99_06630) | hpt | 1373818..1374348 (+) | 531 | WP_006958121.1 | hypoxanthine phosphoribosyltransferase | - |
| G3U99_RS06660 (G3U99_06635) | can | 1374406..1375065 (-) | 660 | WP_006958120.1 | carbonate dehydratase | - |
| G3U99_RS06665 (G3U99_06640) | - | 1375420..1377090 (+) | 1671 | WP_021457058.1 | SulP family inorganic anion transporter | - |
| G3U99_RS06670 (G3U99_06645) | - | 1377291..1378205 (+) | 915 | WP_021457059.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 201 a.a. Molecular weight: 23243.41 Da Isoelectric Point: 5.2990
>NTDB_id=422401 G3U99_RS06650 WP_006958122.1 1372906..1373511(-) (opaR) [Vibrio coralliilyticus OCN008]
MDSIAKRPRTRLSPQKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLNYVVRQFSNFLS
DNIDLDIHAKENLRNLTSAMVDLVVNDCHWLKVWFEWSASTRDEVWPLFVTTNRTNQLLVQNMFIKAIERGEVCDDHDPA
DLATLFHGICYSLFVQANRTQDDESVNRLTQSYLDMLCIYK
MDSIAKRPRTRLSPQKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLNYVVRQFSNFLS
DNIDLDIHAKENLRNLTSAMVDLVVNDCHWLKVWFEWSASTRDEVWPLFVTTNRTNQLLVQNMFIKAIERGEVCDDHDPA
DLATLFHGICYSLFVQANRTQDDESVNRLTQSYLDMLCIYK
Nucleotide
Download Length: 606 bp
>NTDB_id=422401 G3U99_RS06650 WP_006958122.1 1372906..1373511(-) (opaR) [Vibrio coralliilyticus OCN008]
ATGGATTCTATAGCTAAGAGACCGCGTACGCGTCTTTCACCACAAAAACGCAAACAACAACTGATGGAAATCGCATTAGA
GGTGTTTGCTCGTCGTGGTATTGGTCGCGGTGGTCATGCTGACATTGCAGAAATCGCTCAGGTTTCTGTTGCTACTGTTT
TTAACTACTTCCCAACCCGCGAAGACTTGGTTGATGATGTACTTAACTACGTAGTTCGTCAGTTCTCAAACTTCCTATCA
GATAATATCGATCTTGATATTCATGCAAAAGAAAACCTACGCAACCTAACTTCGGCAATGGTTGACCTTGTTGTCAACGA
CTGCCACTGGCTTAAAGTTTGGTTCGAGTGGAGTGCATCGACACGTGATGAAGTATGGCCACTGTTTGTTACGACAAACC
GTACCAACCAGCTTCTAGTTCAGAACATGTTTATCAAAGCAATCGAGCGCGGTGAAGTATGTGATGATCACGACCCAGCA
GACCTAGCGACACTATTCCACGGCATCTGCTACTCATTGTTTGTCCAGGCTAACCGTACTCAAGATGATGAGTCTGTAAA
CCGCCTGACACAAAGCTACCTAGATATGCTTTGCATCTACAAGTAG
ATGGATTCTATAGCTAAGAGACCGCGTACGCGTCTTTCACCACAAAAACGCAAACAACAACTGATGGAAATCGCATTAGA
GGTGTTTGCTCGTCGTGGTATTGGTCGCGGTGGTCATGCTGACATTGCAGAAATCGCTCAGGTTTCTGTTGCTACTGTTT
TTAACTACTTCCCAACCCGCGAAGACTTGGTTGATGATGTACTTAACTACGTAGTTCGTCAGTTCTCAAACTTCCTATCA
GATAATATCGATCTTGATATTCATGCAAAAGAAAACCTACGCAACCTAACTTCGGCAATGGTTGACCTTGTTGTCAACGA
CTGCCACTGGCTTAAAGTTTGGTTCGAGTGGAGTGCATCGACACGTGATGAAGTATGGCCACTGTTTGTTACGACAAACC
GTACCAACCAGCTTCTAGTTCAGAACATGTTTATCAAAGCAATCGAGCGCGGTGAAGTATGTGATGATCACGACCCAGCA
GACCTAGCGACACTATTCCACGGCATCTGCTACTCATTGTTTGTCCAGGCTAACCGTACTCAAGATGATGAGTCTGTAAA
CCGCCTGACACAAAGCTACCTAGATATGCTTTGCATCTACAAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
85 |
99.502 |
0.846 |
| hapR | Vibrio cholerae C6706 |
76.382 |
99.005 |
0.756 |
| hapR | Vibrio cholerae strain A1552 |
76.382 |
99.005 |
0.756 |