Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | LYSZa7_RS29130 | Genome accession | NZ_CP061699 |
| Coordinates | 6295625..6295990 (-) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain LYSZa7 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 6290625..6300990
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LYSZa7_RS29115 (LYSZa7_29030) | pilK | 6291969..6292844 (-) | 876 | WP_003084594.1 | type 4 fimbrial methyltransferase PilK | - |
| LYSZa7_RS29120 (LYSZa7_29035) | pilJ | 6292905..6294953 (-) | 2049 | WP_003084592.1 | chemotaxis chemoreceptor PilJ | - |
| LYSZa7_RS29125 (LYSZa7_29040) | - | 6295038..6295574 (-) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| LYSZa7_RS29130 (LYSZa7_29045) | pilH | 6295625..6295990 (-) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| LYSZa7_RS29135 (LYSZa7_29050) | pilG | 6296037..6296444 (-) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| LYSZa7_RS29140 (LYSZa7_29055) | gshB | 6296699..6297652 (+) | 954 | WP_003100943.1 | glutathione synthase | - |
| LYSZa7_RS29145 (LYSZa7_29060) | - | 6297799..6298692 (+) | 894 | WP_003084580.1 | TonB family protein | - |
| LYSZa7_RS29150 (LYSZa7_29065) | - | 6298741..6299310 (+) | 570 | WP_003084577.1 | YqgE/AlgH family protein | - |
| LYSZa7_RS29155 (LYSZa7_29070) | ruvX | 6299310..6299744 (+) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| LYSZa7_RS29160 (LYSZa7_29075) | pyrR | 6299856..6300368 (+) | 513 | WP_200200103.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=422199 LYSZa7_RS29130 WP_003084587.1 6295625..6295990(-) (pilH) [Pseudomonas aeruginosa strain LYSZa7]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=422199 LYSZa7_RS29130 WP_003084587.1 6295625..6295990(-) (pilH) [Pseudomonas aeruginosa strain LYSZa7]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAGTTGACCAAGGACGCTGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCGCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAGTTGACCAAGGACGCTGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCGCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |