Detailed information NTG0422198

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: G0029_RS10005
• Genome accession: NZ_CP048670
• Coordinates: 2056355..2056984 (-)
• Length: 209 a.a.
• NCBI ID: WP_180109748.1
• Uniprot ID: A0A7S7AMV7
• Organism: Acinetobacter sp. YH12138 strain YH12138_T
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2051355..2061984

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G0029_RS09975 (G0029_09965)	-	2051756..2052187 (-)	432	WP_180106658.1	SRPBCC family protein	-
G0029_RS09980 (G0029_09970)	tadA	2052214..2052765 (-)	552	WP_078188939.1	tRNA adenosine(34) deaminase TadA	-
G0029_RS09985 (G0029_09975)	-	2052773..2053894 (-)	1122	WP_078188941.1	enoyl-CoA hydratase/isomerase family protein	-
G0029_RS09990 (G0029_09980)	ung	2053891..2054604 (-)	714	WP_111885056.1	uracil-DNA glycosylase	-
G0029_RS09995 (G0029_09985)	-	2054641..2055237 (-)	597	WP_078193661.1	6-pyruvoyl trahydropterin synthase family protein	-
G0029_RS10000 (G0029_09990)	gspK	2055368..2056315 (-)	948	WP_180106660.1	type II secretion system minor pseudopilin GspK	-
G0029_RS10005 (G0029_09995)	xcpW	2056355..2056984 (-)	630	WP_180109748.1	type II secretion system minor pseudopilin GspJ	Machinery gene
G0029_RS10010 (G0029_10000)	xcpV	2057031..2057423 (-)	393	WP_078188947.1	type II secretion system minor pseudopilin GspI	Machinery gene
G0029_RS10015 (G0029_10005)	-	2057413..2057970 (-)	558	WP_078193664.1	type II secretion system protein	-
G0029_RS10020 (G0029_10010)	-	2057980..2058594 (-)	615	WP_078193665.1	TetR/AcrR family transcriptional regulator	-
G0029_RS10025 (G0029_10015)	-	2058637..2059410 (-)	774	WP_180022528.1	TatD family hydrolase	-
G0029_RS10030 (G0029_10020)	-	2059442..2059783 (-)	342	WP_111885061.1	PilZ domain-containing protein	-
G0029_RS10035 (G0029_10025)	-	2059799..2060782 (-)	984	WP_180059027.1	DNA polymerase III subunit delta'	-
G0029_RS10040 (G0029_10030)	kdsB	2060796..2061557 (-)	762	WP_180106666.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 209 a.a.
• Molecular weight: 23740.88 Da
• Isoelectric Point: 5.7428

>NTDB_id=422198 G0029_RS10005 WP_180109748.1 2056355..2056984(-) (xcpW) [Acinetobacter sp. YH12138 strain YH12138_T]
MRNRAGFTLVELLVATAIFAVLSALGWKVFDYVSKVKERNATHEVRLSQLQDAHQQILRDTVQAVPLTANINGDIQPALV
LQNGRFNFSKTGVTDPLNQGIAPDERVEYQYKADEKKLYRLKFKNLNQTGHDQPDSSVLLDNVEQYKITVLNPNELENWP
DAAADLNNEKTIQLLPRGIRMQLTVDGTNYEWLFSLLNTDFLLDKNKNG

Nucleotide

• Length: 630 bp

>NTDB_id=422198 G0029_RS10005 WP_180109748.1 2056355..2056984(-) (xcpW) [Acinetobacter sp. YH12138 strain YH12138_T]
ATGAGGAATCGAGCAGGATTTACCTTAGTTGAGCTTTTGGTTGCGACTGCTATTTTCGCAGTGCTGTCTGCTTTGGGCTG
GAAGGTCTTTGATTATGTCTCAAAAGTTAAAGAGCGAAACGCAACCCATGAAGTAAGGCTCAGTCAGTTGCAAGATGCCC
ATCAGCAAATACTCAGAGACACTGTACAAGCTGTGCCGTTAACTGCCAATATTAATGGAGATATTCAACCAGCGTTAGTA
TTGCAAAATGGCCGATTTAATTTCAGTAAGACAGGTGTCACTGATCCATTAAATCAGGGCATTGCACCTGACGAGCGAGT
GGAATATCAATACAAAGCTGATGAAAAAAAATTGTATCGGCTAAAATTTAAAAATCTCAACCAAACGGGGCATGATCAGC
CAGATTCGAGTGTTTTACTGGATAATGTTGAACAATATAAAATCACGGTACTCAATCCAAATGAGTTAGAGAATTGGCCA
GATGCTGCCGCTGATTTGAATAATGAAAAAACCATTCAACTGTTACCGCGGGGTATCAGGATGCAGCTCACAGTTGATGG
GACAAACTACGAATGGTTATTCAGTTTGTTAAATACTGATTTTTTATTGGATAAAAATAAGAATGGTTAG

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (59-193)

• Prokaryotic N-terminal methylation motif (N_methyl) (1-25)

3D structure

• AlphaFold DB: A0A7S7AMV7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	57.561	98.086	0.565