Detailed information NTG0422122

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: G0027_RS06910
• Genome accession: NZ_CP048654
• Coordinates: 1445096..1446451 (+)
• Length: 451 a.a.
• NCBI ID: WP_218954000.1
• Uniprot ID: -
• Organism: Acinetobacter indicus strain C15_T
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 1440096..1451451

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G0027_RS06890 (G0027_06895)	thrC	1440268..1441413 (+)	1146	WP_152342164.1	threonine synthase	-
G0027_RS06895 (G0027_06900)	-	1441506..1442588 (-)	1083	WP_127799456.1	serine hydrolase	-
G0027_RS06900 (G0027_06905)	-	1442806..1443441 (+)	636	WP_005181577.1	response regulator	-
G0027_RS06905 (G0027_06910)	pilS	1443456..1445024 (+)	1569	WP_104489117.1	PAS domain-containing sensor histidine kinase	Regulator
G0027_RS06910 (G0027_06915)	pilR	1445096..1446451 (+)	1356	WP_218954000.1	sigma-54 dependent transcriptional regulator	Regulator
G0027_RS06915 (G0027_06920)	-	1446470..1447639 (-)	1170	WP_152342162.1	S41 family peptidase	-
G0027_RS06920 (G0027_06925)	gpmI	1447663..1449210 (-)	1548	WP_005181570.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
G0027_RS06925 (G0027_06930)	lptG	1449329..1450399 (-)	1071	WP_005181568.1	LPS export ABC transporter permease LptG	-

Sequence

Protein

• Length: 451 a.a.
• Molecular weight: 50636.34 Da
• Isoelectric Point: 6.8256

>NTDB_id=422122 G0027_RS06910 WP_218954000.1 1445096..1446451(+) (pilR) [Acinetobacter indicus strain C15_T]
MQMTLARMGIQTHVAHRLEQARQLLSSHHYDACITDLNLPDGNGLQLVELIAQHFPQLPVAVLTAYGNMEIAIAALKAGA
FDFVSKPINQKHLEQLLEKALNQPLFKAHSQEANQLEQRMLIGQSLPIQQLRTTLKKIARSQAPVFISGESGTGKEVVAN
LVHRLSNRSDGPFIAINCGAIPGDLMESEFFGHKKGSFTGAAQDKQGLIQSAHGGSLFLDEIAELPLNMQVKLLRAVQEK
RIRPVGSDTEIDVDFRIISASHQDLEALVQQGRFRQDLFFRIHVMDIVLPPLRERGQDILLLAQHFIQKIAQEWDIHSKT
LSERAQQFLLEQYYPGNVRELRNIIERAMTLSDDDVIDLPHLQTAPLRKMAPLAEPETDTATPVTADALPAAPRKLPEEG
LELFLEKIEKEILLNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDTDE

Nucleotide

• Length: 1356 bp

>NTDB_id=422122 G0027_RS06910 WP_218954000.1 1445096..1446451(+) (pilR) [Acinetobacter indicus strain C15_T]
ATGCAAATGACATTGGCGCGCATGGGGATTCAAACACACGTGGCACACCGGCTGGAGCAAGCACGTCAGCTGCTGTCCAG
TCATCACTATGACGCCTGCATCACCGATCTGAATTTGCCTGATGGAAATGGCCTGCAACTGGTCGAGCTGATTGCCCAGC
ATTTTCCGCAGCTGCCGGTTGCGGTGCTGACGGCCTATGGCAATATGGAAATTGCCATTGCCGCGCTCAAAGCCGGAGCC
TTTGATTTTGTCAGCAAACCGATTAACCAGAAACACCTCGAACAATTGCTGGAAAAAGCACTGAATCAGCCGCTGTTTAA
AGCACATAGCCAGGAAGCGAACCAGCTGGAACAGCGGATGCTGATCGGGCAATCTCTGCCAATTCAGCAACTACGCACCA
CCCTGAAAAAAATTGCCCGCTCGCAGGCACCGGTGTTTATTAGCGGTGAATCAGGCACCGGGAAAGAAGTGGTGGCCAAT
CTGGTGCATCGCCTCAGCAACCGCAGTGACGGGCCTTTTATTGCCATCAACTGTGGTGCCATTCCGGGCGATTTGATGGA
AAGCGAATTCTTCGGCCATAAAAAAGGCAGCTTTACCGGTGCAGCGCAGGACAAACAGGGCCTGATTCAGTCAGCACACG
GCGGTAGCCTGTTCCTGGATGAAATTGCCGAACTGCCGCTCAATATGCAGGTGAAACTGCTGCGCGCGGTGCAGGAAAAA
CGGATTCGTCCGGTCGGTTCCGATACGGAAATTGATGTTGATTTCCGGATTATTAGTGCCAGCCATCAGGACCTGGAAGC
GTTAGTCCAGCAAGGCCGGTTCCGTCAGGATCTGTTCTTCCGGATTCATGTGATGGATATTGTGCTGCCGCCACTGCGTG
AGCGCGGTCAAGATATTTTATTGCTGGCCCAGCATTTTATTCAGAAAATTGCCCAGGAATGGGATATACACAGCAAAACC
CTGTCGGAACGTGCCCAGCAGTTTTTGCTGGAACAGTATTATCCGGGTAATGTGCGTGAGCTGCGCAATATCATTGAACG
TGCCATGACCTTGAGTGATGATGATGTGATTGATCTGCCGCATCTGCAGACCGCACCGTTACGCAAGATGGCGCCACTGG
CCGAGCCAGAAACCGACACTGCAACACCGGTTACAGCCGATGCCCTGCCCGCTGCTCCGCGTAAACTGCCGGAAGAAGGA
CTGGAGCTGTTTCTGGAGAAAATCGAAAAAGAGATTTTGCTGAATGCGCTGAATCTGACCCATTGGAACCGGACTTTGGC
TGCGAAAAAACTGGGGATGTCGTTTCGTTCCCTGCGTTATCGGCTGAAGAAATTCGGACTGGATACCGATGAATAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (3-97)

• Bacterial regulatory protein, Fis family (HTH_8) (404-445)

• Sigma-54 interaction domain (Sigma54_activat) (121-287)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	74.058	100	0.741
pilR	Pseudomonas aeruginosa PAK	50.334	99.557	0.501