Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | GAU34_RS05025 | Genome accession | NZ_CP048643 |
| Coordinates | 1031635..1032030 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain SR153 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1026635..1037030
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GAU34_RS04995 (GAU34_04995) | - | 1027893..1028297 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| GAU34_RS05000 (GAU34_05000) | - | 1028635..1028727 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| GAU34_RS05005 (GAU34_05005) | - | 1028859..1029092 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| GAU34_RS05010 (GAU34_05010) | murA | 1029203..1030468 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| GAU34_RS05015 (GAU34_05015) | fabZ | 1030502..1030942 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| GAU34_RS05020 (GAU34_05020) | - | 1031001..1031441 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| GAU34_RS05025 (GAU34_05025) | ssb | 1031635..1032030 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| GAU34_RS05030 (GAU34_05030) | sceD | 1032419..1033114 (+) | 696 | WP_000752005.1 | lytic transglycosylase SceD | - |
| GAU34_RS05035 (GAU34_05035) | tenA | 1033501..1034190 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| GAU34_RS05040 (GAU34_05040) | thiD | 1034183..1035013 (+) | 831 | WP_000594954.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| GAU34_RS05045 (GAU34_05045) | thiM | 1034997..1035788 (+) | 792 | WP_001108483.1 | hydroxyethylthiazole kinase | - |
| GAU34_RS05050 (GAU34_05050) | thiE | 1035790..1036431 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=422012 GAU34_RS05025 WP_000932694.1 1031635..1032030(+) (ssb) [Staphylococcus aureus strain SR153]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=422012 GAU34_RS05025 WP_000932694.1 1031635..1032030(+) (ssb) [Staphylococcus aureus strain SR153]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |