Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   G3M63_RS05695 Genome accession   NZ_CP048629
Coordinates   1224725..1225141 (+) Length   138 a.a.
NCBI ID   WP_150302081.1    Uniprot ID   A0A6C0TNR1
Organism   Pseudomonas sp. OIL-1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1219725..1230141
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G3M63_RS05670 (G3M63_05670) pyrR 1220659..1221165 (-) 507 WP_150302076.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  G3M63_RS05675 (G3M63_05675) ruvX 1221162..1221599 (-) 438 WP_163982117.1 Holliday junction resolvase RuvX -
  G3M63_RS05680 (G3M63_05680) - 1221599..1222168 (-) 570 WP_163982118.1 YqgE/AlgH family protein -
  G3M63_RS05685 (G3M63_05685) - 1222277..1223176 (-) 900 WP_163982119.1 energy transducer TonB -
  G3M63_RS05690 (G3M63_05690) gshB 1223545..1224507 (-) 963 WP_163982120.1 glutathione synthase -
  G3M63_RS05695 (G3M63_05695) pilG 1224725..1225141 (+) 417 WP_150302081.1 twitching motility response regulator PilG Regulator
  G3M63_RS05700 (G3M63_05700) pilH 1225178..1225543 (+) 366 WP_150302082.1 twitching motility response regulator PilH -
  G3M63_RS05705 (G3M63_05705) - 1225596..1226132 (+) 537 WP_150302083.1 chemotaxis protein CheW -
  G3M63_RS05710 (G3M63_05710) - 1226214..1228253 (+) 2040 WP_150302084.1 methyl-accepting chemotaxis protein -
  G3M63_RS05715 (G3M63_05715) - 1228348..1229190 (+) 843 WP_371923576.1 protein-glutamate O-methyltransferase CheR -

Sequence

Protein


Download         Length: 138 a.a.        Molecular weight: 15028.43 Da        Isoelectric Point: 7.8542

>NTDB_id=421968 G3M63_RS05695 WP_150302081.1 1224725..1225141(+) (pilG) [Pseudomonas sp. OIL-1]
MEENFESLKVMVIDDSKTIRRTAETLLKKVGCTVITAVDGFDALAKIADNHPDIIFVDIMMPRLDGYQTCALIKNNSAFR
ATPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIRAHVPQTQNKVAGAAGA

Nucleotide


Download         Length: 417 bp        

>NTDB_id=421968 G3M63_RS05695 WP_150302081.1 1224725..1225141(+) (pilG) [Pseudomonas sp. OIL-1]
ATGGAAGAAAATTTCGAGAGCCTGAAGGTCATGGTCATCGATGACAGCAAGACCATTCGACGGACGGCAGAAACGCTGCT
GAAAAAAGTCGGATGCACTGTCATCACTGCGGTGGACGGCTTTGACGCCCTGGCCAAGATTGCTGACAATCACCCCGATA
TCATTTTTGTCGACATCATGATGCCGCGTCTCGACGGCTATCAGACCTGCGCGCTGATCAAGAACAACAGTGCCTTCCGT
GCTACCCCTGTGATCATGTTGTCCAGCAAGGATGGCCTGTTCGATAAAGCGAAGGGCCGCATAGTGGGTTCTGATCAATA
CCTTACCAAGCCCTTCAGCAAGGAAGAGCTTCTCGGCGCGATCCGCGCCCATGTTCCGCAAACCCAAAACAAAGTCGCTG
GTGCTGCCGGGGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6C0TNR1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

78.4

90.58

0.71
  vicR Streptococcus mutans UA159

42.188

92.754

0.391

Multiple sequence alignment