Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | GZ067_RS12880 | Genome accession | NZ_CP048431 |
| Coordinates | 2624524..2624919 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain SA1428 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2619524..2629919
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GZ067_RS12850 (GZ067_12845) | - | 2620782..2621186 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| GZ067_RS12855 (GZ067_12850) | - | 2621524..2621616 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| GZ067_RS12860 (GZ067_12855) | - | 2621748..2621981 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| GZ067_RS12865 (GZ067_12860) | murA | 2622092..2623357 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| GZ067_RS12870 (GZ067_12865) | fabZ | 2623391..2623831 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| GZ067_RS12875 (GZ067_12870) | - | 2623890..2624330 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| GZ067_RS12880 (GZ067_12875) | ssb | 2624524..2624919 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| GZ067_RS12885 (GZ067_12880) | sceD | 2625308..2626003 (+) | 696 | WP_000752001.1 | lytic transglycosylase SceD | - |
| GZ067_RS12890 (GZ067_12885) | tenA | 2626528..2627217 (+) | 690 | WP_164026387.1 | thiaminase II | - |
| GZ067_RS12895 (GZ067_12890) | thiD | 2627210..2628040 (+) | 831 | WP_070047582.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| GZ067_RS12900 (GZ067_12895) | thiM | 2628024..2628815 (+) | 792 | WP_001108478.1 | hydroxyethylthiazole kinase | - |
| GZ067_RS12905 (GZ067_12900) | thiE | 2628817..2629458 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=421316 GZ067_RS12880 WP_000932694.1 2624524..2624919(+) (ssb) [Staphylococcus aureus strain SA1428]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=421316 GZ067_RS12880 WP_000932694.1 2624524..2624919(+) (ssb) [Staphylococcus aureus strain SA1428]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |