Detailed information
Bioinformatically predicted
Overview
| Name | mecA | Type | Regulator |
| Locus tag | LCGT_RS01995 | Genome accession | NC_015930 |
| Coordinates | 410234..410917 (+) | Length | 227 a.a. |
| NCBI ID | WP_004259224.1 | Uniprot ID | A0A1I4FNQ8 |
| Organism | Lactococcus garvieae ATCC 49156 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 405234..415917
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LCGT_RS01985 (LCGT_0391) | rpoC | 405341..408988 (+) | 3648 | WP_004259228.1 | DNA-directed RNA polymerase subunit beta' | - |
| LCGT_RS01990 (LCGT_0392) | - | 409080..409988 (-) | 909 | WP_014024330.1 | diacylglycerol/lipid kinase family protein | - |
| LCGT_RS01995 (LCGT_0393) | mecA | 410234..410917 (+) | 684 | WP_004259224.1 | adaptor protein MecA | Regulator |
| LCGT_RS02000 (LCGT_0394) | - | 410921..412177 (+) | 1257 | WP_014024331.1 | glycosyltransferase family 4 protein | - |
| LCGT_RS02005 (LCGT_0395) | sufC | 412255..413025 (+) | 771 | WP_014024332.1 | Fe-S cluster assembly ATPase SufC | - |
| LCGT_RS02010 (LCGT_0396) | sufD | 413097..414353 (+) | 1257 | WP_014024333.1 | Fe-S cluster assembly protein SufD | - |
| LCGT_RS02015 (LCGT_0397) | - | 414353..415564 (+) | 1212 | WP_014024334.1 | cysteine desulfurase | - |
Sequence
Protein
Download Length: 227 a.a. Molecular weight: 26239.38 Da Isoelectric Point: 4.0202
>NTDB_id=42096 LCGT_RS01995 WP_004259224.1 410234..410917(+) (mecA) [Lactococcus garvieae ATCC 49156]
MQYEEINEKTIKISLTFQDLVDHDVKLSDFFTNQSMVENLFYELVEELGLEERFSSGLLTFQIQPFPKGVNIIVTEENID
IDPNNLPDDPEEFEQLMTDFFGRVEDLKQNGGTMADTSTTETKETKVENKPDPDFVFYSLEFENMSQLLTAVKNVKIDAE
ESELYSYQDKFYLIILDNQKSKGKTAVSSMRARMLEYGQETVNSRETLQEYGEILINTRALEVLSKI
MQYEEINEKTIKISLTFQDLVDHDVKLSDFFTNQSMVENLFYELVEELGLEERFSSGLLTFQIQPFPKGVNIIVTEENID
IDPNNLPDDPEEFEQLMTDFFGRVEDLKQNGGTMADTSTTETKETKVENKPDPDFVFYSLEFENMSQLLTAVKNVKIDAE
ESELYSYQDKFYLIILDNQKSKGKTAVSSMRARMLEYGQETVNSRETLQEYGEILINTRALEVLSKI
Nucleotide
Download Length: 684 bp
>NTDB_id=42096 LCGT_RS01995 WP_004259224.1 410234..410917(+) (mecA) [Lactococcus garvieae ATCC 49156]
ATGCAATACGAAGAAATAAACGAAAAAACGATAAAGATTAGCCTAACCTTTCAAGATTTGGTTGATCATGATGTCAAACT
CTCTGATTTTTTTACTAACCAGTCGATGGTTGAAAATCTTTTTTATGAATTAGTAGAAGAGCTAGGACTTGAGGAAAGAT
TCTCATCAGGACTTTTAACTTTCCAAATTCAACCTTTCCCTAAAGGGGTGAATATCATTGTTACCGAGGAAAATATTGAT
ATTGATCCCAATAATCTCCCGGATGATCCTGAAGAATTTGAGCAGCTGATGACGGATTTCTTTGGGCGTGTGGAAGATTT
AAAACAAAATGGCGGAACAATGGCAGATACAAGTACAACTGAAACGAAAGAAACAAAAGTAGAAAATAAACCAGACCCAG
ATTTTGTCTTCTATTCTCTAGAATTTGAAAATATGTCTCAACTTTTGACAGCAGTAAAAAATGTTAAAATTGATGCAGAA
GAGTCTGAACTTTACAGTTACCAAGATAAGTTTTATTTGATTATTTTGGACAATCAAAAATCAAAAGGAAAAACAGCCGT
AAGTTCGATGCGTGCCCGAATGTTAGAATACGGCCAGGAAACGGTCAACAGTCGTGAAACCCTACAAGAATACGGCGAGA
TACTAATCAATACGCGTGCTTTGGAAGTTCTCTCAAAAATTTAA
ATGCAATACGAAGAAATAAACGAAAAAACGATAAAGATTAGCCTAACCTTTCAAGATTTGGTTGATCATGATGTCAAACT
CTCTGATTTTTTTACTAACCAGTCGATGGTTGAAAATCTTTTTTATGAATTAGTAGAAGAGCTAGGACTTGAGGAAAGAT
TCTCATCAGGACTTTTAACTTTCCAAATTCAACCTTTCCCTAAAGGGGTGAATATCATTGTTACCGAGGAAAATATTGAT
ATTGATCCCAATAATCTCCCGGATGATCCTGAAGAATTTGAGCAGCTGATGACGGATTTCTTTGGGCGTGTGGAAGATTT
AAAACAAAATGGCGGAACAATGGCAGATACAAGTACAACTGAAACGAAAGAAACAAAAGTAGAAAATAAACCAGACCCAG
ATTTTGTCTTCTATTCTCTAGAATTTGAAAATATGTCTCAACTTTTGACAGCAGTAAAAAATGTTAAAATTGATGCAGAA
GAGTCTGAACTTTACAGTTACCAAGATAAGTTTTATTTGATTATTTTGGACAATCAAAAATCAAAAGGAAAAACAGCCGT
AAGTTCGATGCGTGCCCGAATGTTAGAATACGGCCAGGAAACGGTCAACAGTCGTGAAACCCTACAAGAATACGGCGAGA
TACTAATCAATACGCGTGCTTTGGAAGTTCTCTCAAAAATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| mecA | Lactococcus lactis subsp. cremoris KW2 |
54.661 |
100 |
0.568 |
| mecA | Lactococcus lactis subsp. lactis strain DGCC12653 |
54.077 |
100 |
0.555 |