Detailed information NTG0420927

Bioinformatically predicted

Overview

• Name: pptB
• Type: Regulator
• Locus tag: D39N_RS02340
• Genome accession: NZ_CP061208
• Coordinates: 475541..476590 (+)
• Length: 349 a.a.
• NCBI ID: WP_000653770.1
• Uniprot ID: Q8DQW6
• Organism: Streptococcus pneumoniae strain D39_P0
• Function: export ComS (predicted from homology) Competence regulation

Genomic Context

Location: 470541..481590

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D39N_RS02315 (D39N_00462)	-	471827..472183 (+)	357	WP_000114427.1	hypothetical protein	-
D39N_RS02320 (D39N_00463)	dnaJ	472585..473703 (+)	1119	WP_001066302.1	molecular chaperone DnaJ	-
D39N_RS02325 (D39N_00464)	-	474038..474325 (-)	288	WP_000777760.1	hypothetical protein	-
D39N_RS02330 (D39N_00465)	-	474335..474745 (-)	411	WP_001278301.1	HIT family protein	-
D39N_RS02335 (D39N_00466)	pptA	474813..475544 (+)	732	WP_000889919.1	ABC transporter ATP-binding protein	Regulator
D39N_RS02340 (D39N_00467)	pptB	475541..476590 (+)	1050	WP_000653770.1	ABC transporter permease	Regulator
D39N_RS02345 (D39N_00468)	-	476758..477087 (-)	330	WP_000132569.1	hypothetical protein	-
D39N_RS02350 (D39N_00469)	-	477363..477701 (+)	339	WP_000682124.1	LytTR family DNA-binding domain-containing protein	-
D39N_RS02355 (D39N_00470)	comE/blpR	477706..478443 (+)	738	WP_001219139.1	response regulator transcription factor	Regulator
D39N_RS02360 (D39N_00471)	-	478457..479797 (+)	1341	WP_001017622.1	sensor histidine kinase	-
D39N_RS02365 (D39N_00472)	blpC	479839..479994 (-)	156	WP_000358817.1	quorum-sensing system pheromone BlpC	-
D39N_RS02370 (D39N_00473)	-	480051..481412 (-)	1362	Protein_473	bacteriocin secretion accessory protein	-

Sequence

Protein

• Length: 349 a.a.
• Molecular weight: 40556.62 Da
• Isoelectric Point: 10.0008

>NTDB_id=420927 D39N_RS02340 WP_000653770.1 475541..476590(+) (pptB) [Streptococcus pneumoniae strain D39_P0]
MKDLFLKRKQAFRKECLGYLRYVLNDHFVLFLLVLLGFLAYQYSQLLQHFPENHWPILLFVGITSVLLLLWGGIATYMEA
PDKLFLLVGEEEIKLHLKRQTGISLVFWLFVQTLFLLLFAPLFLAMGYGLPVFLLYVLLLGVGKYFHFRQKASKFFTETG
LDWDYVISQESKRKQVLLRFFALFTQVKGISNSVKRRAYLDFILKAVQKVPGKIWQNLYLRSYLRNGDLFAISLRLLLLS
VLAQVFIEQAWIATAVVVLFNYLLLFQLLALYHAFDYQYLTQLFPLDKGQKEKGLQEVVRGLTSFVLLVELVVGLITFQE
KLALLALLGAGLVLLVLYLPYQVKRQMQD

Nucleotide

• Length: 1050 bp

>NTDB_id=420927 D39N_RS02340 WP_000653770.1 475541..476590(+) (pptB) [Streptococcus pneumoniae strain D39_P0]
ATGAAAGACTTGTTTTTAAAGAGAAAGCAGGCCTTTCGTAAGGAGTGTCTTGGTTATCTGCGCTATGTGCTCAATGACCA
CTTTGTCTTGTTCCTGCTTGTCCTGTTGGGCTTTCTAGCCTACCAGTACAGTCAACTCTTACAACATTTTCCTGAAAATC
ATTGGCCTATCCTTTTGTTTGTAGGAATTACGTCTGTTTTACTCTTACTTTGGGGAGGAATTGCCACCTATATGGAGGCT
CCAGACAAGCTCTTTCTCTTAGTTGGAGAAGAGGAAATCAAGCTCCATCTCAAGCGTCAAACTGGCATTTCCCTAGTCTT
TTGGCTCTTTGTACAGACCCTTTTCTTGCTGTTATTTGCGCCTTTATTTTTAGCAATGGGTTATGGCTTGCCAGTTTTTC
TGCTCTATGTGCTTTTATTGGGGGTAGGAAAATATTTCCACTTTCGTCAAAAGGCCAGCAAATTTTTTACTGAAACTGGA
CTGGACTGGGACTATGTTATTTCTCAAGAAAGCAAGCGTAAGCAAGTCTTGCTTCGTTTCTTTGCCCTCTTTACGCAGGT
CAAGGGAATTTCAAACAGCGTTAAGCGTCGTGCCTATCTGGACTTTATCTTAAAGGCTGTTCAGAAGGTGCCTGGGAAGA
TTTGGCAAAATCTCTATCTGCGTTCTTATCTGCGAAATGGCGACCTCTTTGCTATCAGTCTTCGTCTTCTATTACTTTCC
GTACTGGCGCAGGTTTTTATCGAGCAAGCTTGGATTGCGACAGCAGTGGTAGTTCTCTTTAACTACCTCTTGCTCTTCCA
GTTGCTGGCCCTCTATCATGCCTTTGACTACCAGTATTTGACCCAACTCTTTCCGCTGGACAAGGGGCAAAAGGAAAAAG
GCTTACAGGAGGTAGTTCGAGGATTGACCAGTTTTGTTTTACTTGTGGAATTAGTTGTTGGGTTGATTACCTTCCAAGAA
AAACTGGCCCTTCTAGCCTTACTAGGAGCTGGTTTGGTTTTACTAGTCTTGTATTTGCCTTATCAGGTAAAACGTCAGAT
GCAGGACTAA

Domains

Predicted by InterProScan.

• Bacterial ABC transporter protein EcsB (EcsB) (2-156)

• Bacterial ABC transporter protein EcsB (EcsB) (158-331)

3D structure

• AlphaFold DB: Q8DQW6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pptB	Streptococcus salivarius strain HSISS4	47.429	100	0.476
pptB	Streptococcus thermophilus LMD-9	46.571	100	0.467