Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   IAU66_RS08630 Genome accession   NZ_CP061168
Coordinates   1723125..1724393 (+) Length   422 a.a.
NCBI ID   WP_088005384.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain T-5     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1718125..1729393
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IAU66_RS08605 pyrH 1718920..1719642 (+) 723 WP_003154213.1 UMP kinase -
  IAU66_RS08610 frr 1719645..1720202 (+) 558 WP_003154212.1 ribosome recycling factor -
  IAU66_RS08615 - 1720328..1721110 (+) 783 WP_043867093.1 isoprenyl transferase -
  IAU66_RS08620 - 1721114..1721911 (+) 798 WP_021734132.1 phosphatidate cytidylyltransferase -
  IAU66_RS08625 dxr 1721967..1723118 (+) 1152 WP_003154208.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  IAU66_RS08630 eeP 1723125..1724393 (+) 1269 WP_088005384.1 RIP metalloprotease RseP Regulator
  IAU66_RS08635 proS 1724425..1726119 (+) 1695 WP_015388230.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46554.46 Da        Isoelectric Point: 6.5190

>NTDB_id=420655 IAU66_RS08630 WP_088005384.1 1723125..1724393(+) (eeP) [Bacillus amyloliquefaciens strain T-5]
MFVNTVIAFIIIFGTLVFFHELGHLLLAQRAGILCREFAIGFGPKIFSFKKNETVYTIRLLPVGGFVRMAGEDPEMIEVK
PGYTVGLLFNKEDEVEKVIINQKEKYPDALIIEVETADLEHEMKITGYEQGKEDELAGFTVSQTSFFIVDGEEVQIAPYN
RQFGSKPVWKRIKAIAAGPIMNFILAYVILVMLGFIQGVPSNQPELGKLTDNGRAAAAGLKEGDYIQSINGEKMRSWTDI
VTAVKENPGKKIDVAVKRDGKSFHISVTPEAVKDENKKTIGRFGSYAPTEKGALAAIAYGATSTVDVTKAILTNLSKLVT
GQFKLDMLSGPVGIYDMTDQVAKTGIINLFQFAAFLSINLGIVNLLPIPALDGGRLLFLFIEAIRGKPINRDKEAFVVFI
GVAFLMLLMLVVTWNDIQRLFL

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=420655 IAU66_RS08630 WP_088005384.1 1723125..1724393(+) (eeP) [Bacillus amyloliquefaciens strain T-5]
ATGTTCGTGAATACAGTTATCGCGTTTATTATTATTTTCGGAACGCTCGTTTTTTTCCATGAGCTCGGGCATTTATTGCT
CGCCCAAAGAGCGGGAATCCTTTGCCGTGAATTTGCGATCGGCTTCGGCCCTAAAATCTTTTCATTTAAAAAGAATGAAA
CCGTGTATACGATCAGACTCCTTCCGGTCGGAGGGTTCGTCCGCATGGCCGGTGAAGACCCGGAGATGATCGAAGTCAAA
CCCGGTTATACCGTCGGGCTTCTTTTTAATAAAGAGGACGAAGTGGAAAAAGTCATCATTAATCAAAAGGAAAAATATCC
CGACGCTTTAATTATCGAGGTGGAGACGGCTGATCTTGAGCACGAAATGAAGATTACCGGGTACGAGCAGGGGAAAGAAG
ATGAACTGGCGGGCTTTACTGTCAGTCAGACCTCTTTTTTTATCGTAGACGGAGAAGAAGTGCAGATTGCGCCTTACAAT
CGACAATTCGGGTCTAAACCCGTATGGAAGCGGATTAAGGCGATTGCTGCCGGTCCGATTATGAACTTCATCTTAGCGTA
TGTCATTCTCGTCATGCTCGGATTCATTCAAGGCGTGCCTTCAAATCAGCCTGAACTCGGGAAGCTGACAGACAATGGAC
GCGCAGCTGCTGCAGGTTTAAAAGAAGGCGACTATATCCAGAGCATTAACGGTGAAAAAATGAGGTCATGGACCGACATC
GTGACAGCGGTAAAAGAAAATCCCGGGAAAAAAATCGATGTCGCCGTCAAACGGGATGGCAAATCGTTTCATATCTCGGT
TACACCTGAAGCTGTAAAAGATGAAAATAAAAAAACAATCGGCCGCTTCGGCTCTTATGCGCCGACTGAAAAAGGCGCGC
TTGCAGCGATTGCTTACGGCGCGACATCTACCGTTGATGTCACAAAAGCGATCCTGACCAATCTGAGCAAACTTGTGACA
GGCCAGTTTAAGCTTGATATGCTTTCGGGTCCTGTCGGCATTTATGATATGACGGATCAAGTTGCAAAAACCGGTATTAT
CAACCTATTCCAGTTTGCGGCGTTTTTAAGCATCAACCTGGGAATCGTCAACCTGCTGCCGATACCGGCGCTTGACGGCG
GACGGCTGCTGTTTTTATTCATAGAAGCAATCCGCGGCAAGCCGATAAACCGTGACAAGGAAGCATTTGTCGTATTTATC
GGCGTAGCTTTCTTAATGCTTCTTATGCTGGTTGTCACATGGAACGATATCCAGCGTTTATTCTTATAA

Domains

Predicted by InterProScan.

PDZ domain (PDZ_6)

(212-258)

Peptidase family M50 (Peptidase_M50)

(8-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

39.302

100

0.4
  eeP Streptococcus thermophilus LMG 18311

39.437

100

0.398

Multiple sequence alignment