Detailed information NTG0420646

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: IAU66_RS07885
• Genome accession: NZ_CP061168
• Coordinates: 1573125..1574147 (+)
• Length: 340 a.a.
• NCBI ID: WP_003154464.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain T-5
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 1568125..1579147

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IAU66_RS07845	-	1568484..1568723 (+)	240	WP_003154475.1	YlbE-like family protein	-
IAU66_RS07850	ylbF	1568794..1569243 (+)	450	WP_003154472.1	YlbF family regulator	Regulator
IAU66_RS07855	-	1569302..1569574 (+)	273	WP_003154470.1	YlbG family protein	-
IAU66_RS07860	-	1569665..1569874 (+)	210	WP_015388275.1	hypothetical protein	-
IAU66_RS07865	rsmD	1569874..1570428 (+)	555	WP_032856757.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
IAU66_RS07870	coaD	1570433..1570915 (+)	483	WP_024085272.1	pantetheine-phosphate adenylyltransferase	-
IAU66_RS07875	ylbJ	1570934..1572160 (-)	1227	WP_024085273.1	sporulation integral membrane protein YlbJ	-
IAU66_RS07880	-	1572340..1573119 (+)	780	WP_014304961.1	patatin family protein	-
IAU66_RS07885	sepM	1573125..1574147 (+)	1023	WP_003154464.1	SepM family pheromone-processing serine protease	Regulator
IAU66_RS07890	-	1574166..1575413 (-)	1248	WP_024085274.1	nucleotidyltransferase	-
IAU66_RS07895	-	1575622..1576140 (+)	519	WP_003154459.1	DUF177 domain-containing protein	-
IAU66_RS07900	rpmF	1576162..1576341 (+)	180	WP_003154457.1	50S ribosomal protein L32	-
IAU66_RS07905	gerR	1576500..1577075 (+)	576	WP_003154450.1	sporulation-specific transcriptional regulator GerR	-
IAU66_RS07910	-	1577116..1577598 (-)	483	WP_003154449.1	N-acetyltransferase	-
IAU66_RS07915	-	1577761..1578642 (+)	882	WP_024085275.1	2-dehydropantoate 2-reductase	-

Sequence

Protein

• Length: 340 a.a.
• Molecular weight: 37418.97 Da
• Isoelectric Point: 7.3848

>NTDB_id=420646 IAU66_RS07885 WP_003154464.1 1573125..1574147(+) (sepM) [Bacillus amyloliquefaciens strain T-5]
MKAKHFRWVFIILILLIAVTFIKLPYYITQPGEASELRPLIKVDGGYPEKGSLSLMTVKVGPANPYTYLWAKVHPYDEIV
PDESIKEEGESDSDYMKRQLQMMKSSQENAVIAAYQKAGKQVKYSFNGIFASSVVSDMPAKGKIEVGDKIISADGKTYES
AEKLIDYISSKKAGEKVTFHIERDTKEKTVDIVLKSFPDDPKRAGIGVALYTDRNVKVKPDLHFSIENIGGPSAGLMMSL
EIYNQLTKPDETKGYNIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGAENSDYKNAVKTAKAIKSDMKIV
PVDTMQDALDYLDQLKVKST

Nucleotide

• Length: 1023 bp

>NTDB_id=420646 IAU66_RS07885 WP_003154464.1 1573125..1574147(+) (sepM) [Bacillus amyloliquefaciens strain T-5]
ATGAAAGCAAAACATTTTCGCTGGGTGTTTATCATCCTGATCTTATTAATTGCTGTTACATTTATTAAGCTTCCGTATTA
TATTACACAGCCGGGAGAAGCATCAGAGCTGAGACCGCTGATTAAGGTGGACGGAGGCTATCCTGAAAAAGGAAGCCTTT
CCTTGATGACTGTCAAAGTAGGCCCCGCCAATCCGTATACATATCTTTGGGCGAAAGTGCATCCTTACGATGAAATCGTC
CCTGATGAAAGCATAAAAGAAGAGGGCGAATCGGACTCGGATTATATGAAGCGCCAGCTGCAAATGATGAAAAGCTCCCA
AGAAAACGCGGTCATTGCCGCTTATCAAAAAGCCGGGAAACAGGTGAAATACTCATTTAACGGGATTTTCGCCAGCTCAG
TCGTCTCTGACATGCCGGCAAAAGGAAAAATAGAGGTCGGAGATAAAATCATCAGCGCGGACGGGAAAACATACGAATCC
GCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCGGGGGAAAAAGTAACGTTCCACATTGAACGGGACACGAAAGA
AAAGACCGTTGACATTGTGCTGAAATCATTCCCGGACGACCCGAAAAGAGCGGGAATCGGCGTCGCGTTATATACGGATC
GGAACGTGAAGGTGAAGCCGGATCTCCATTTCAGCATTGAAAATATCGGCGGGCCTTCTGCGGGTCTCATGATGTCTTTA
GAAATTTACAACCAGCTGACAAAACCTGACGAAACAAAAGGCTATAATATAGCCGGAACGGGGACAATCGACGTGGACGG
CAAGGTCGGACCGATCGGCGGAATCGATCAGAAAGTCGTCGCCGCAGACAAAGCGGGAAAAGATATTTTCTTTGCGCCGA
ATCAAAACGGAGCTGAAAATTCTGATTACAAAAATGCGGTAAAAACAGCGAAAGCAATCAAGTCCGATATGAAGATCGTC
CCTGTCGACACCATGCAGGACGCACTTGACTATTTGGATCAGCTGAAAGTAAAAAGCACCTGA

Domains

Predicted by InterProScan.

• Peptidase family M50 (Peptidase_M50) (100-218)

• PDZ domain (PDZ_2) (128-193)

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (231-330)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	38.663	100	0.391