Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | GZH82_RS07240 | Genome accession | NZ_CP048279 |
| Coordinates | 1555762..1556736 (+) | Length | 324 a.a. |
| NCBI ID | WP_162681920.1 | Uniprot ID | - |
| Organism | Staphylococcus sp. MI 10-1553 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1550762..1561736
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GZH82_RS07205 (GZH82_07205) | rpmG | 1551150..1551314 (+) | 165 | WP_256726578.1 | 50S ribosomal protein L33 | - |
| GZH82_RS07210 (GZH82_07210) | - | 1551463..1552002 (+) | 540 | WP_162681916.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| GZH82_RS07215 (GZH82_07215) | - | 1552021..1553460 (+) | 1440 | WP_162681917.1 | rhomboid family intramembrane serine protease | - |
| GZH82_RS07220 (GZH82_07220) | - | 1553462..1553665 (+) | 204 | WP_014613816.1 | YqgQ family protein | - |
| GZH82_RS07225 (GZH82_07225) | - | 1553662..1554648 (+) | 987 | WP_162681918.1 | ROK family glucokinase | - |
| GZH82_RS07230 (GZH82_07230) | - | 1554649..1554960 (+) | 312 | WP_019165228.1 | MTH1187 family thiamine-binding protein | - |
| GZH82_RS07235 (GZH82_07235) | - | 1554973..1555602 (+) | 630 | WP_162681919.1 | MBL fold metallo-hydrolase | - |
| GZH82_RS07240 (GZH82_07240) | comGA | 1555762..1556736 (+) | 975 | WP_162681920.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| GZH82_RS07245 (GZH82_07245) | comGB | 1556705..1557772 (+) | 1068 | WP_162681921.1 | competence type IV pilus assembly protein ComGB | - |
| GZH82_RS07250 (GZH82_07250) | comGC | 1557785..1558108 (+) | 324 | WP_096541451.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| GZH82_RS07255 (GZH82_07255) | comGD | 1558086..1558529 (+) | 444 | WP_162681922.1 | competence type IV pilus minor pilin ComGD | - |
| GZH82_RS14440 (GZH82_07260) | - | 1558631..1558831 (+) | 201 | WP_275401855.1 | hypothetical protein | - |
| GZH82_RS07265 (GZH82_07265) | - | 1558737..1559222 (+) | 486 | WP_162681923.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| GZH82_RS07270 (GZH82_07270) | - | 1559386..1559913 (+) | 528 | WP_162681924.1 | shikimate kinase | - |
| GZH82_RS07275 (GZH82_07275) | gcvT | 1560072..1561163 (+) | 1092 | WP_162681925.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36920.65 Da Isoelectric Point: 6.9674
>NTDB_id=420553 GZH82_RS07240 WP_162681920.1 1555762..1556736(+) (comGA) [Staphylococcus sp. MI 10-1553]
MQLLLDHVIQFALQNEASDIHFIPSQSQVEVKLRVKDQLVLYDTLNLETYQKLLTLLKYQAGLDISTRHKAQSGRYIYEH
KELFYLRVSTLPINLGTESCVIRITPQYFQYAKAHSVLDIKSNMEKKQGLILFSGPTGAGKSTLMYQMVVYAKQKLNLNI
ITIEDPVEQLVNGITQISVNEKADITYGSSLKAILRCDPDVILIGEIRDSHIARDVIQASLSGHLVLSTIHANDCQGVLL
RLIEMGLSQQDLSQSINLIINQRLITTKNEQRQLVYETMDQQEIHYFLNNNFQLPTAFTSLSDKLQLLNKEGVIDEKILR
KYTI
MQLLLDHVIQFALQNEASDIHFIPSQSQVEVKLRVKDQLVLYDTLNLETYQKLLTLLKYQAGLDISTRHKAQSGRYIYEH
KELFYLRVSTLPINLGTESCVIRITPQYFQYAKAHSVLDIKSNMEKKQGLILFSGPTGAGKSTLMYQMVVYAKQKLNLNI
ITIEDPVEQLVNGITQISVNEKADITYGSSLKAILRCDPDVILIGEIRDSHIARDVIQASLSGHLVLSTIHANDCQGVLL
RLIEMGLSQQDLSQSINLIINQRLITTKNEQRQLVYETMDQQEIHYFLNNNFQLPTAFTSLSDKLQLLNKEGVIDEKILR
KYTI
Nucleotide
Download Length: 975 bp
>NTDB_id=420553 GZH82_RS07240 WP_162681920.1 1555762..1556736(+) (comGA) [Staphylococcus sp. MI 10-1553]
ATGCAACTACTATTAGATCATGTAATACAATTTGCACTTCAAAATGAGGCATCAGACATTCATTTCATCCCTTCACAATC
ACAAGTCGAAGTTAAACTCAGAGTCAAAGATCAACTTGTATTATATGACACATTAAATCTAGAAACATATCAAAAATTGT
TAACTTTGTTGAAATATCAAGCCGGATTAGATATTTCAACACGCCACAAAGCACAAAGTGGGCGCTACATTTATGAACAT
AAAGAGTTATTTTACTTAAGAGTGTCCACGTTACCTATAAACTTAGGTACTGAAAGTTGTGTCATTCGTATCACACCCCA
ATATTTTCAATATGCGAAAGCTCACAGTGTCTTAGATATTAAATCCAATATGGAGAAAAAGCAAGGTTTAATTCTGTTTA
GTGGTCCAACAGGTGCAGGAAAAAGCACATTAATGTATCAAATGGTCGTCTATGCTAAACAAAAATTAAACCTTAATATC
ATCACTATAGAAGATCCCGTGGAGCAGCTTGTAAACGGGATTACACAAATTTCAGTTAACGAAAAAGCAGATATTACGTA
TGGTTCATCGTTAAAAGCAATCCTTCGTTGTGATCCGGATGTCATCTTAATTGGAGAGATTCGTGACAGTCATATTGCAA
GGGATGTTATTCAAGCGAGTTTAAGCGGTCATTTAGTATTGTCGACGATACACGCCAATGATTGCCAAGGGGTACTCCTG
AGACTGATTGAAATGGGACTCTCACAGCAAGATCTATCTCAATCTATTAACCTCATCATCAATCAAAGACTCATTACAAC
AAAAAATGAACAGCGACAGCTCGTCTATGAAACGATGGATCAACAAGAGATTCACTACTTTTTGAACAATAATTTTCAAC
TACCAACTGCTTTCACAAGCCTTTCTGATAAGCTTCAACTTCTGAATAAAGAAGGTGTCATAGATGAAAAGATTTTACGA
AAGTATACGATTTAA
ATGCAACTACTATTAGATCATGTAATACAATTTGCACTTCAAAATGAGGCATCAGACATTCATTTCATCCCTTCACAATC
ACAAGTCGAAGTTAAACTCAGAGTCAAAGATCAACTTGTATTATATGACACATTAAATCTAGAAACATATCAAAAATTGT
TAACTTTGTTGAAATATCAAGCCGGATTAGATATTTCAACACGCCACAAAGCACAAAGTGGGCGCTACATTTATGAACAT
AAAGAGTTATTTTACTTAAGAGTGTCCACGTTACCTATAAACTTAGGTACTGAAAGTTGTGTCATTCGTATCACACCCCA
ATATTTTCAATATGCGAAAGCTCACAGTGTCTTAGATATTAAATCCAATATGGAGAAAAAGCAAGGTTTAATTCTGTTTA
GTGGTCCAACAGGTGCAGGAAAAAGCACATTAATGTATCAAATGGTCGTCTATGCTAAACAAAAATTAAACCTTAATATC
ATCACTATAGAAGATCCCGTGGAGCAGCTTGTAAACGGGATTACACAAATTTCAGTTAACGAAAAAGCAGATATTACGTA
TGGTTCATCGTTAAAAGCAATCCTTCGTTGTGATCCGGATGTCATCTTAATTGGAGAGATTCGTGACAGTCATATTGCAA
GGGATGTTATTCAAGCGAGTTTAAGCGGTCATTTAGTATTGTCGACGATACACGCCAATGATTGCCAAGGGGTACTCCTG
AGACTGATTGAAATGGGACTCTCACAGCAAGATCTATCTCAATCTATTAACCTCATCATCAATCAAAGACTCATTACAAC
AAAAAATGAACAGCGACAGCTCGTCTATGAAACGATGGATCAACAAGAGATTCACTACTTTTTGAACAATAATTTTCAAC
TACCAACTGCTTTCACAAGCCTTTCTGATAAGCTTCAACTTCTGAATAAAGAAGGTGTCATAGATGAAAAGATTTTACGA
AAGTATACGATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
58.204 |
99.691 |
0.58 |
| comGA | Staphylococcus aureus N315 |
58.204 |
99.691 |
0.58 |