Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   GZH82_RS04965 Genome accession   NZ_CP048279
Coordinates   1123559..1124602 (+) Length   347 a.a.
NCBI ID   WP_162681568.1    Uniprot ID   A0A6P1WZH8
Organism   Staphylococcus sp. MI 10-1553     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1118559..1129602
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GZH82_RS04935 (GZH82_04935) - 1118601..1119479 (+) 879 WP_275401875.1 pyridoxal phosphate-dependent aminotransferase -
  GZH82_RS04940 (GZH82_04940) - 1119463..1119633 (+) 171 WP_162681563.1 chorismate mutase -
  GZH82_RS14510 - 1119751..1119855 (-) 105 WP_343236285.1 ATP-binding protein -
  GZH82_RS04945 (GZH82_04945) - 1120504..1121502 (-) 999 WP_162681564.1 aromatic acid exporter family protein -
  GZH82_RS04950 (GZH82_04950) map 1121600..1122361 (+) 762 WP_162681565.1 type I methionyl aminopeptidase -
  GZH82_RS04955 (GZH82_04955) - 1122459..1122848 (+) 390 WP_162681566.1 hypothetical protein -
  GZH82_RS04960 (GZH82_04960) liaF 1122861..1123562 (+) 702 WP_162681567.1 cell wall-active antibiotics response protein LiaF -
  GZH82_RS04965 (GZH82_04965) vraS 1123559..1124602 (+) 1044 WP_162681568.1 sensor histidine kinase Regulator
  GZH82_RS04970 (GZH82_04970) vraR 1124592..1125221 (+) 630 WP_014613482.1 response regulator transcription factor Regulator
  GZH82_RS04975 (GZH82_04975) - 1125276..1125857 (-) 582 WP_162681569.1 carbonic anhydrase -
  GZH82_RS04980 (GZH82_04980) - 1125890..1127236 (-) 1347 WP_162681570.1 YihY/virulence factor BrkB family protein -
  GZH82_RS04985 (GZH82_04985) - 1127453..1127740 (-) 288 WP_014613485.1 YtxH domain-containing protein -
  GZH82_RS04990 (GZH82_04990) - 1127748..1128206 (-) 459 WP_162681571.1 low molecular weight protein-tyrosine-phosphatase -
  GZH82_RS04995 (GZH82_04995) - 1128339..1128542 (+) 204 WP_162681572.1 DUF1128 family protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 39902.13 Da        Isoelectric Point: 4.9503

>NTDB_id=420543 GZH82_RS04965 WP_162681568.1 1123559..1124602(+) (vraS) [Staphylococcus sp. MI 10-1553]
MNHYVRAIGSMLILVYSMLTAFFFIDKVFTNIIFFQGMFYTQILGIPVFIFLNLVVIFLCIIVGSVLAYKINQQNDWVKQ
QIVRAFEGETVGINDQQLELYNETIELYQALVPLNQELHKMRIKTQNLTNETYNLNDLKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETDLASPLDQQIPTLEKMVQDSQLEMRALLLHLRPIGLKDKSLGEGIKSLVTDLQRKVPIKVVQEI
DEFEVPKGIEDHLFRITQEAISNTLRHAEGTQVTVELLNRNDYLLLRIQDDGIGFDVDDKLEQSYGLKNMRERAIEIGAT
FHIVSLPDAGTRIEVKAPLEKEEQHDN

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=420543 GZH82_RS04965 WP_162681568.1 1123559..1124602(+) (vraS) [Staphylococcus sp. MI 10-1553]
ATGAATCACTACGTCCGAGCGATAGGTTCGATGCTAATTCTTGTATATAGTATGCTCACAGCGTTTTTCTTTATTGATAA
AGTGTTTACAAATATTATTTTCTTTCAAGGCATGTTTTATACACAAATTTTAGGAATTCCTGTTTTTATCTTTTTGAATT
TAGTCGTCATTTTTTTATGTATTATTGTGGGCAGTGTGTTAGCTTATAAAATCAATCAACAAAATGATTGGGTCAAGCAG
CAAATCGTTCGTGCTTTTGAAGGCGAAACAGTAGGAATCAATGACCAACAACTTGAGCTGTACAATGAAACGATTGAATT
GTATCAAGCACTCGTCCCATTGAATCAAGAATTGCATAAAATGCGGATTAAAACACAAAATTTAACGAATGAAACGTATA
ACTTAAATGATTTAAAGGTGAAAAAGATTATTGAAGATGAACGACAGCGTTTAGCACGAGAATTGCATGATAGTGTGTCG
CAACAACTTTTCGCGGCAAGTATGATGTTGTCTGCAATCAAGGAAACGGATTTAGCATCACCGTTAGATCAACAAATTCC
AACGTTAGAAAAAATGGTTCAAGACTCACAACTTGAAATGCGCGCACTGTTACTTCATTTGAGACCTATAGGATTGAAGG
ACAAATCGTTAGGTGAGGGGATTAAGTCGCTCGTGACGGATCTACAACGCAAAGTGCCCATTAAAGTTGTTCAAGAAATT
GATGAGTTTGAAGTGCCTAAAGGAATTGAGGATCACCTCTTTAGAATTACCCAAGAAGCGATTTCCAATACGTTACGACA
CGCTGAGGGGACGCAAGTAACGGTAGAATTACTTAACCGCAATGATTATTTATTGTTGCGTATACAAGATGACGGCATTG
GATTTGATGTCGATGATAAGTTAGAACAAAGTTACGGATTAAAAAATATGCGCGAACGTGCAATAGAGATTGGTGCCACG
TTTCATATCGTCTCATTACCTGATGCAGGGACGAGAATAGAAGTGAAAGCACCACTTGAAAAGGAGGAACAGCATGACAA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6P1WZH8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

82.997

100

0.83


Multiple sequence alignment