Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   IB937_RS02135 Genome accession   NZ_CP061132
Coordinates   415035..416069 (+) Length   344 a.a.
NCBI ID   WP_010922583.1    Uniprot ID   A0A0H2UWB0
Organism   Streptococcus pyogenes strain BSAC_bs1388 isolate Invasive disease     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 410035..421069
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IB937_RS02105 (IB937_02105) tsaE 411100..411561 (+) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  IB937_RS02110 (IB937_02110) - 411536..412060 (+) 525 WP_002994338.1 GNAT family N-acetyltransferase -
  IB937_RS02115 (IB937_02115) brpA 412069..413352 (+) 1284 WP_002983372.1 biofilm formation/cell division transcriptional regulator BrpA -
  IB937_RS02120 (IB937_02120) - 413463..413819 (-) 357 WP_002983373.1 hypothetical protein -
  IB937_RS02125 (IB937_02125) - 413816..414235 (-) 420 WP_002983376.1 HIT family protein -
  IB937_RS02130 (IB937_02130) pptA 414307..415032 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  IB937_RS02135 (IB937_02135) pptB 415035..416069 (+) 1035 WP_010922583.1 ABC transporter permease Regulator
  IB937_RS02140 (IB937_02140) ccrZ 416133..416924 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  IB937_RS02145 (IB937_02145) trmB 416924..417559 (+) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  IB937_RS02155 (IB937_02155) rimP 417818..418354 (+) 537 WP_011528897.1 ribosome maturation factor RimP -
  IB937_RS02160 (IB937_02160) nusA 418529..419686 (+) 1158 WP_002983485.1 transcription termination factor NusA -
  IB937_RS02165 (IB937_02165) rnpM 419702..419998 (+) 297 WP_002983486.1 RNase P modulator RnpM -
  IB937_RS02170 (IB937_02170) - 419991..420293 (+) 303 WP_002983488.1 YlxQ-related RNA-binding protein -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40274.52 Da        Isoelectric Point: 10.3713

>NTDB_id=420329 IB937_RS02135 WP_010922583.1 415035..416069(+) (pptB) [Streptococcus pyogenes strain BSAC_bs1388 isolate Invasive disease]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=420329 IB937_RS02135 WP_010922583.1 415035..416069(+) (pptB) [Streptococcus pyogenes strain BSAC_bs1388 isolate Invasive disease]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTTTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(158-330)

Bacterial ABC transporter protein EcsB (EcsB)

(2-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UWB0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43
  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427