Detailed information
Bioinformatically predicted
Overview
| Name | comE | Type | Machinery gene |
| Locus tag | GYN05_RS08645 | Genome accession | NZ_CP048250 |
| Coordinates | 1658649..1659044 (-) | Length | 131 a.a. |
| NCBI ID | WP_003703428.1 | Uniprot ID | - |
| Organism | Neisseria gonorrhoeae strain CT532 | ||
| Function | DNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1653649..1664044
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GYN05_RS08610 (GYN05_08390) | - | 1653951..1654196 (-) | 246 | WP_003689849.1 | hypothetical protein | - |
| GYN05_RS08615 (GYN05_08395) | - | 1654308..1654736 (+) | 429 | WP_020997399.1 | CopD family protein | - |
| GYN05_RS08620 (GYN05_08400) | - | 1654748..1655224 (+) | 477 | WP_003689851.1 | CYTH domain-containing protein | - |
| GYN05_RS08625 (GYN05_08405) | - | 1655254..1655742 (-) | 489 | WP_025455834.1 | dihydrofolate reductase | - |
| GYN05_RS08630 (GYN05_08410) | aroG | 1655810..1656865 (-) | 1056 | WP_003689853.1 | 3-deoxy-7-phosphoheptulonate synthase AroG | - |
| GYN05_RS08635 (GYN05_08415) | - | 1657010..1657255 (-) | 246 | WP_154235562.1 | hypothetical protein | - |
| GYN05_RS11795 (GYN05_08420) | - | 1657483..1657779 (+) | 297 | WP_003689859.1 | hypothetical protein | - |
| GYN05_RS11800 (GYN05_08425) | - | 1657776..1658015 (+) | 240 | WP_012503951.1 | membrane protein | - |
| GYN05_RS11935 | - | 1658568..1658715 (+) | 148 | Protein_1688 | peptidase | - |
| GYN05_RS08645 (GYN05_08430) | comE | 1658649..1659044 (-) | 396 | WP_003703428.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| GYN05_RS08650 | - | 1659146..1659265 (-) | 120 | Protein_1690 | competence protein ComE | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 13796.61 Da Isoelectric Point: 10.8790
>NTDB_id=420203 GYN05_RS08645 WP_003703428.1 1658649..1659044(-) (comE) [Neisseria gonorrhoeae strain CT532]
MSRGGATPYRFLLIRHIVARCGLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNINAASQQELEALPGIGPAKAKAIAEY
RAQNGAFKSVDDLIKVKGIGPAVLAKLKDQASVGAPAPKGPAKPVLPAVKK
MSRGGATPYRFLLIRHIVARCGLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNINAASQQELEALPGIGPAKAKAIAEY
RAQNGAFKSVDDLIKVKGIGPAVLAKLKDQASVGAPAPKGPAKPVLPAVKK
Nucleotide
Download Length: 396 bp
>NTDB_id=420203 GYN05_RS08645 WP_003703428.1 1658649..1659044(-) (comE) [Neisseria gonorrhoeae strain CT532]
TTGAGCCGGGGCGGGGCAACGCCGTACCGGTTTTTGTTAATCCGCCATATCGTCGCAAGATGCGGTTTGTTGTTTGCAAC
CCTTAAAGGAAAAACCATGAAAAAAATGTTTGTATTGTTCTGTATGCTGTTCTCCTGCGCCTTCTCCCTTGCGGCGGTAA
ACATCAATGCGGCTTCGCAGCAGGAGCTGGAGGCGCTGCCGGGCATAGGCCCGGCGAAGGCGAAGGCCATTGCGGAATAC
CGCGCGCAAAACGGCGCGTTCAAGTCTGTGGACGATTTGATCAAGGTGAAGGGCATCGGTCCGGCGGTGCTGGCGAAGCT
GAAAGACCAGGCTTCCGTCGGCGCGCCCGCACCAAAAGGCCCCGCCAAACCGGTGCTGCCTGCGGTTAAAAAATAG
TTGAGCCGGGGCGGGGCAACGCCGTACCGGTTTTTGTTAATCCGCCATATCGTCGCAAGATGCGGTTTGTTGTTTGCAAC
CCTTAAAGGAAAAACCATGAAAAAAATGTTTGTATTGTTCTGTATGCTGTTCTCCTGCGCCTTCTCCCTTGCGGCGGTAA
ACATCAATGCGGCTTCGCAGCAGGAGCTGGAGGCGCTGCCGGGCATAGGCCCGGCGAAGGCGAAGGCCATTGCGGAATAC
CGCGCGCAAAACGGCGCGTTCAAGTCTGTGGACGATTTGATCAAGGTGAAGGGCATCGGTCCGGCGGTGCTGGCGAAGCT
GAAAGACCAGGCTTCCGTCGGCGCGCCCGCACCAAAAGGCCCCGCCAAACCGGTGCTGCCTGCGGTTAAAAAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |
| comE | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |
| comE | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |
| comE | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |