Detailed information
Bioinformatically predicted
Overview
| Name | comE | Type | Machinery gene |
| Locus tag | GYN06_RS08665 | Genome accession | NZ_CP048246 |
| Coordinates | 1662653..1663048 (-) | Length | 131 a.a. |
| NCBI ID | WP_003703428.1 | Uniprot ID | - |
| Organism | Neisseria gonorrhoeae strain CT602 | ||
| Function | DNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1657653..1668048
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GYN06_RS08630 (GYN06_08405) | - | 1657967..1658212 (-) | 246 | WP_003689849.1 | hypothetical protein | - |
| GYN06_RS08635 (GYN06_08410) | - | 1658324..1658752 (+) | 429 | WP_020997399.1 | CopD family protein | - |
| GYN06_RS08640 (GYN06_08415) | - | 1658764..1659239 (+) | 476 | Protein_1685 | CYTH domain-containing protein | - |
| GYN06_RS08645 (GYN06_08420) | - | 1659269..1659757 (-) | 489 | WP_047920276.1 | dihydrofolate reductase | - |
| GYN06_RS08650 (GYN06_08425) | aroG | 1659825..1660880 (-) | 1056 | WP_003689853.1 | 3-deoxy-7-phosphoheptulonate synthase AroG | - |
| GYN06_RS08655 (GYN06_08430) | - | 1661042..1661269 (-) | 228 | WP_153707886.1 | hypothetical protein | - |
| GYN06_RS11740 (GYN06_08435) | - | 1661497..1661793 (+) | 297 | WP_003689859.1 | hypothetical protein | - |
| GYN06_RS11745 (GYN06_08440) | - | 1661790..1662029 (+) | 240 | WP_003689861.1 | membrane protein | - |
| GYN06_RS11890 | - | 1662572..1662719 (+) | 148 | Protein_1691 | peptidase | - |
| GYN06_RS08665 (GYN06_08445) | comE | 1662653..1663048 (-) | 396 | WP_003703428.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| GYN06_RS08670 | - | 1663150..1663269 (-) | 120 | Protein_1693 | competence protein ComE | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 13796.61 Da Isoelectric Point: 10.8790
>NTDB_id=420155 GYN06_RS08665 WP_003703428.1 1662653..1663048(-) (comE) [Neisseria gonorrhoeae strain CT602]
MSRGGATPYRFLLIRHIVARCGLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNINAASQQELEALPGIGPAKAKAIAEY
RAQNGAFKSVDDLIKVKGIGPAVLAKLKDQASVGAPAPKGPAKPVLPAVKK
MSRGGATPYRFLLIRHIVARCGLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNINAASQQELEALPGIGPAKAKAIAEY
RAQNGAFKSVDDLIKVKGIGPAVLAKLKDQASVGAPAPKGPAKPVLPAVKK
Nucleotide
Download Length: 396 bp
>NTDB_id=420155 GYN06_RS08665 WP_003703428.1 1662653..1663048(-) (comE) [Neisseria gonorrhoeae strain CT602]
TTGAGCCGGGGCGGGGCAACGCCGTACCGGTTTTTGTTAATCCGCCATATCGTCGCAAGATGCGGTTTGTTGTTTGCAAC
CCTTAAAGGAAAAACCATGAAAAAAATGTTTGTATTGTTCTGTATGCTGTTCTCCTGCGCCTTCTCCCTTGCGGCGGTAA
ACATCAATGCGGCTTCGCAGCAGGAGCTGGAGGCGCTGCCGGGCATAGGCCCGGCGAAGGCGAAGGCCATTGCGGAATAC
CGCGCGCAAAACGGCGCGTTCAAGTCTGTGGACGATTTGATCAAGGTGAAGGGCATCGGTCCGGCGGTGCTGGCGAAGCT
GAAAGACCAGGCTTCCGTCGGCGCGCCCGCACCAAAAGGCCCCGCCAAACCGGTGCTGCCTGCGGTTAAAAAATAG
TTGAGCCGGGGCGGGGCAACGCCGTACCGGTTTTTGTTAATCCGCCATATCGTCGCAAGATGCGGTTTGTTGTTTGCAAC
CCTTAAAGGAAAAACCATGAAAAAAATGTTTGTATTGTTCTGTATGCTGTTCTCCTGCGCCTTCTCCCTTGCGGCGGTAA
ACATCAATGCGGCTTCGCAGCAGGAGCTGGAGGCGCTGCCGGGCATAGGCCCGGCGAAGGCGAAGGCCATTGCGGAATAC
CGCGCGCAAAACGGCGCGTTCAAGTCTGTGGACGATTTGATCAAGGTGAAGGGCATCGGTCCGGCGGTGCTGGCGAAGCT
GAAAGACCAGGCTTCCGTCGGCGCGCCCGCACCAAAAGGCCCCGCCAAACCGGTGCTGCCTGCGGTTAAAAAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |
| comE | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |
| comE | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |
| comE | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |