Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   M662_RS11630 Genome accession   NZ_CP048117
Coordinates   2215038..2216765 (-) Length   575 a.a.
NCBI ID   WP_026577225.1    Uniprot ID   A0A7Z2SX95
Organism   Bacillus sp. SB49     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2210038..2221765
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M662_RS11610 (M662_11595) - 2210718..2212067 (-) 1350 WP_026577226.1 aspartate kinase -
  M662_RS11615 (M662_11600) - 2212276..2212548 (+) 273 WP_008639223.1 hypothetical protein -
  M662_RS11620 (M662_11605) spo0A 2212585..2213364 (-) 780 WP_008639226.1 sporulation transcription factor Spo0A Regulator
  M662_RS11625 (M662_11610) spoIVB 2213607..2214848 (-) 1242 WP_008639228.1 SpoIVB peptidase -
  M662_RS11630 (M662_11615) recN 2215038..2216765 (-) 1728 WP_026577225.1 DNA repair protein RecN Machinery gene
  M662_RS11635 (M662_11620) argR 2216781..2217230 (-) 450 WP_008639233.1 transcriptional regulator ArgR -
  M662_RS11640 (M662_11625) - 2217293..2218117 (-) 825 WP_008639235.1 TlyA family RNA methyltransferase -
  M662_RS11645 (M662_11630) dxs 2218125..2220017 (-) 1893 WP_026577224.1 1-deoxy-D-xylulose-5-phosphate synthase -
  M662_RS11650 (M662_11635) - 2220036..2220635 (-) 600 WP_008639239.1 hypothetical protein -

Sequence

Protein


Download         Length: 575 a.a.        Molecular weight: 65376.06 Da        Isoelectric Point: 4.6956

>NTDB_id=419958 M662_RS11630 WP_026577225.1 2215038..2216765(-) (recN) [Bacillus sp. SB49]
MLTELSIRDFAIIDQISITFKEGLTVLTGETGAGKSIIIDAIQLLSGGRGSVEFVRHGTKKAEIEGLFIVERDHPIYRTG
EAFGVDIQDDGMVVLNRTITNQGKSICRVNGKLVTLGIMKEFGQALIDIHSQHETQSLMDPDRHIELLDVFAGEGIRPTL
EEYQKVFDKYRTLRKRYKDLSQNEQEMAQRLDLLEFQLRELQEAEMEPKEDEELAEERKKLLNYEKIYQGIHDAYYSLYG
EQRGLDWLSHAMTSLESTADVDENIAKISEELANSYYLIEEMTFQLSSQMAELEFDPERLNQMESRLNELNRLKKKYGGT
VDDMLQYASKIEEEIDEIKNKDSHLSKMESDIYELGQDAVLEAKAIHDIRMEAASRLGEYIHEELRDLYLEKASFAVDVR
MKEGKEQDPMFEGKPVQLMPNGTDIVKFLITTNPGEPLKELHKVASGGEMSRIMLALKRIFSRHQGVTSVIFDEVDTGVS
GRVAQAIAEKIYGISEGSQVLCISHLPQVAAMADTHIRIEKRVDNDRTHTAASELTHEEQADEISRMITGAELTETTVEH
AKELLVMADKHKRNK

Nucleotide


Download         Length: 1728 bp        

>NTDB_id=419958 M662_RS11630 WP_026577225.1 2215038..2216765(-) (recN) [Bacillus sp. SB49]
ATGTTAACGGAATTATCCATTCGTGATTTTGCAATTATCGATCAGATTTCCATTACATTTAAAGAAGGTTTGACCGTTTT
AACTGGAGAGACCGGTGCCGGTAAGTCGATTATCATCGATGCTATTCAACTGCTGTCAGGCGGAAGAGGCTCTGTAGAGT
TCGTCCGGCATGGAACGAAAAAGGCGGAAATAGAGGGTTTATTTATCGTGGAGCGCGACCACCCGATTTACCGTACAGGG
GAAGCGTTTGGAGTGGACATTCAGGATGATGGAATGGTTGTCTTGAACAGGACGATTACAAATCAGGGAAAGAGCATATG
TCGCGTAAACGGAAAGCTTGTTACACTTGGCATTATGAAGGAGTTTGGTCAGGCCCTCATTGATATACACAGCCAACATG
AAACACAGTCATTGATGGACCCTGATCGACACATAGAGCTTCTCGATGTATTTGCCGGGGAAGGCATTCGTCCGACGCTT
GAGGAGTATCAGAAGGTCTTTGATAAGTACAGGACATTGAGGAAACGGTATAAGGATTTGAGTCAGAATGAGCAGGAGAT
GGCGCAGCGGCTTGACCTTCTTGAATTTCAGCTTCGCGAACTTCAGGAAGCGGAGATGGAACCTAAAGAGGATGAAGAGC
TGGCTGAGGAACGTAAGAAACTGCTTAATTATGAGAAGATTTATCAAGGCATTCATGATGCCTATTATTCCCTTTATGGT
GAACAGCGGGGTCTCGATTGGCTTAGTCATGCGATGACTTCCTTGGAAAGCACGGCGGATGTCGATGAAAACATCGCAAA
AATATCAGAGGAATTGGCTAATTCTTATTATTTAATCGAAGAAATGACCTTCCAGTTGAGCAGTCAAATGGCTGAACTGG
AATTTGATCCTGAACGATTGAATCAAATGGAGTCAAGGTTGAATGAGCTCAACCGTTTGAAGAAAAAATATGGTGGTACA
GTGGATGATATGCTTCAATACGCATCTAAGATTGAGGAAGAAATTGATGAGATTAAGAACAAAGACTCTCATTTAAGTAA
GATGGAATCAGACATATATGAACTTGGTCAGGATGCCGTATTGGAAGCGAAAGCAATCCACGACATACGAATGGAAGCAG
CTTCGCGTCTAGGGGAATACATTCATGAAGAGCTGCGCGATTTATATTTAGAGAAAGCATCTTTTGCGGTTGATGTCCGT
ATGAAGGAAGGAAAAGAACAGGATCCAATGTTTGAAGGTAAGCCGGTTCAGCTGATGCCAAACGGTACGGATATTGTGAA
ATTCCTCATTACCACAAATCCAGGAGAACCGCTTAAAGAATTACATAAAGTCGCTTCCGGTGGAGAAATGTCACGTATAA
TGCTTGCACTAAAGCGGATATTTTCCAGACACCAGGGAGTAACGAGCGTCATATTCGATGAAGTCGACACAGGTGTAAGC
GGCAGAGTAGCTCAGGCGATTGCTGAGAAGATATACGGCATCTCCGAAGGATCCCAAGTGCTCTGCATCTCCCACCTGCC
ACAAGTAGCTGCAATGGCCGATACGCACATTAGGATTGAGAAGCGCGTGGATAATGATCGAACCCACACGGCTGCTTCGG
AATTAACACACGAAGAGCAGGCGGATGAAATCTCACGAATGATTACCGGCGCAGAATTGACGGAAACGACAGTCGAGCAT
GCAAAAGAACTACTCGTTATGGCAGATAAACATAAACGTAATAAATAA

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-522)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7Z2SX95

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

55.575

99.826

0.555

Multiple sequence alignment