Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   M662_RS11620 Genome accession   NZ_CP048117
Coordinates   2212585..2213364 (-) Length   259 a.a.
NCBI ID   WP_008639226.1    Uniprot ID   -
Organism   Bacillus sp. SB49     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2207585..2218364
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M662_RS11595 (M662_11580) - 2207751..2207987 (+) 237 WP_008639018.1 DUF2627 family protein -
  M662_RS11600 (M662_11585) - 2208012..2209919 (+) 1908 WP_008639016.1 DUF294 nucleotidyltransferase-like domain-containing protein -
  M662_RS11605 (M662_11590) - 2209920..2210666 (+) 747 WP_051348855.1 exonuclease domain-containing protein -
  M662_RS11610 (M662_11595) - 2210718..2212067 (-) 1350 WP_026577226.1 aspartate kinase -
  M662_RS11615 (M662_11600) - 2212276..2212548 (+) 273 WP_008639223.1 hypothetical protein -
  M662_RS11620 (M662_11605) spo0A 2212585..2213364 (-) 780 WP_008639226.1 sporulation transcription factor Spo0A Regulator
  M662_RS11625 (M662_11610) spoIVB 2213607..2214848 (-) 1242 WP_008639228.1 SpoIVB peptidase -
  M662_RS11630 (M662_11615) recN 2215038..2216765 (-) 1728 WP_026577225.1 DNA repair protein RecN Machinery gene
  M662_RS11635 (M662_11620) argR 2216781..2217230 (-) 450 WP_008639233.1 transcriptional regulator ArgR -
  M662_RS11640 (M662_11625) - 2217293..2218117 (-) 825 WP_008639235.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 259 a.a.        Molecular weight: 29240.57 Da        Isoelectric Point: 5.8241

>NTDB_id=419957 M662_RS11620 WP_008639226.1 2212585..2213364(-) (spo0A) [Bacillus sp. SB49]
MEKIQVCLADDNRELVKLLEDYFEDTHDIDVIGTSFNGKDCLQMVEEKNPDVLILDIIMPHLDGLAVLNKLRELDKQPEV
IMLTAFGQEEVTKKAVELGAAYFMMKPFDLDHLGEQVRQIKHAGDPINRALGNTYTSTKSKKPDLDTSITHIIHEVGVPA
HIKGYQYLREAITMVYRDLELLGSITKVLYPDIATKYNTTASRVERAIRHAIEVAWNRGNIDAISSLFGYTISNTKAKPT
NSEFIAMVADRLRLEHKAS

Nucleotide


Download         Length: 780 bp        

>NTDB_id=419957 M662_RS11620 WP_008639226.1 2212585..2213364(-) (spo0A) [Bacillus sp. SB49]
ATGGAAAAAATTCAAGTTTGTTTGGCTGATGATAATCGCGAGCTGGTGAAGCTTCTTGAGGATTATTTTGAGGACACGCA
CGATATCGATGTCATTGGGACGTCATTTAATGGTAAAGATTGTCTCCAAATGGTCGAAGAAAAGAATCCCGATGTGCTCA
TTCTCGACATCATCATGCCTCACTTGGACGGATTAGCGGTTTTGAATAAATTGAGAGAGCTGGACAAGCAGCCGGAAGTG
ATCATGTTAACAGCGTTCGGTCAGGAAGAAGTGACGAAAAAAGCGGTGGAATTAGGTGCTGCCTACTTCATGATGAAACC
GTTCGACCTGGATCACCTGGGAGAGCAGGTCCGCCAGATCAAGCATGCCGGAGATCCGATAAATCGTGCACTTGGAAACA
CCTACACGTCTACGAAGTCCAAGAAACCAGACTTGGATACGAGCATTACGCATATCATTCACGAAGTCGGTGTCCCTGCG
CATATTAAAGGGTATCAATATCTGCGGGAGGCCATCACGATGGTGTATCGCGATTTGGAACTGCTCGGCTCCATTACGAA
AGTCCTTTATCCTGATATTGCAACGAAATACAACACGACGGCTTCCAGAGTGGAAAGGGCGATCCGTCATGCGATTGAAG
TAGCCTGGAATCGTGGAAACATTGACGCGATCTCTTCCTTGTTCGGTTACACCATCTCCAATACGAAAGCAAAACCGACG
AACTCAGAGTTCATCGCAATGGTAGCGGACAGGCTCCGCCTGGAGCATAAAGCAAGTTGA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(149-252)

Response regulator receiver domain (Response_reg)

(6-117)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

69.288

100

0.714

Multiple sequence alignment