Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | M662_RS00780 | Genome accession | NZ_CP048117 |
| Coordinates | 144325..146784 (+) | Length | 819 a.a. |
| NCBI ID | WP_008635846.1 | Uniprot ID | A0A7Z2Y8A1 |
| Organism | Bacillus sp. SB49 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 139325..151784
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M662_RS00760 (M662_00760) | - | 141350..142042 (+) | 693 | WP_026577051.1 | MgtC/SapB family protein | - |
| M662_RS00765 (M662_00765) | - | 142207..142665 (+) | 459 | WP_026577050.1 | CtsR family transcriptional regulator | - |
| M662_RS00770 (M662_00770) | - | 142687..143235 (+) | 549 | WP_008635844.1 | UvrB/UvrC motif-containing protein | - |
| M662_RS00775 (M662_00775) | - | 143236..144306 (+) | 1071 | WP_008635845.1 | protein arginine kinase | - |
| M662_RS00780 (M662_00780) | clpC | 144325..146784 (+) | 2460 | WP_008635846.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| M662_RS00785 (M662_00785) | radA | 146942..148321 (+) | 1380 | WP_008635853.1 | DNA repair protein RadA | Machinery gene |
| M662_RS00790 (M662_00790) | disA | 148322..149395 (+) | 1074 | WP_008635854.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| M662_RS00795 (M662_00795) | - | 149550..150653 (+) | 1104 | WP_008635855.1 | PIN/TRAM domain-containing protein | - |
Sequence
Protein
Download Length: 819 a.a. Molecular weight: 91360.74 Da Isoelectric Point: 5.4416
>NTDB_id=419944 M662_RS00780 WP_008635846.1 144325..146784(+) (clpC) [Bacillus sp. SB49]
MMFGRFTERAQKVLALAQEEAVRLGHNNIGTEHILLGLVSEGEGIAAKALTALGLESSKIQQEVEKLIGKGEKVSQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGNNESTGGQNRRGGASGG
QATNANTPTLDSLARDLTAIAKEGNIDPVIGRSKEIERVIQVLSRRTKNNPVLVGEPGVGKTAIAEGLAQQIMNNEVPEI
LRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMEEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIG
ATTLDEYRKYIEKDAALERRFQPIKVDEPTLDESIQILKGLRDRYEAHHRVTITDDSIESAVRFSDRYITDRFLPDKAID
LIDEAASKVRLRSYTAPPNLKELEQKLEEVRKEKDAAVQSQEFEKAASLRDSEQRLRDELEETKDEWKEKQGQEDSEVTV
EDIASVVSTWTGVPVSKMTKDESERLLNLEETLHNRVIGQEEAVKAISKAIRRARAGLKDPKRPIGSFIFLGPTGVGKTE
LARALAESMFGEEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRNKPYSVVLLDEIEKAHPEVFNILLQV
LEDGRLTDSKGRLVDFRNTVLIMTSNVGASELKQNKYVGFSMGEADQDYKDMKSKVTDALKKAFRPEFLNRIDETIVFHS
LEKKHMKDIVVLMAEELRKRLQEQEIDFTLSDAAIQHIADSGFDPEYGARPLRRAIQKNVEDLLSEELLKENIAKGQKVK
IDLDENKNYVVHTQQESTN
MMFGRFTERAQKVLALAQEEAVRLGHNNIGTEHILLGLVSEGEGIAAKALTALGLESSKIQQEVEKLIGKGEKVSQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGNNESTGGQNRRGGASGG
QATNANTPTLDSLARDLTAIAKEGNIDPVIGRSKEIERVIQVLSRRTKNNPVLVGEPGVGKTAIAEGLAQQIMNNEVPEI
LRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMEEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIG
ATTLDEYRKYIEKDAALERRFQPIKVDEPTLDESIQILKGLRDRYEAHHRVTITDDSIESAVRFSDRYITDRFLPDKAID
LIDEAASKVRLRSYTAPPNLKELEQKLEEVRKEKDAAVQSQEFEKAASLRDSEQRLRDELEETKDEWKEKQGQEDSEVTV
EDIASVVSTWTGVPVSKMTKDESERLLNLEETLHNRVIGQEEAVKAISKAIRRARAGLKDPKRPIGSFIFLGPTGVGKTE
LARALAESMFGEEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRNKPYSVVLLDEIEKAHPEVFNILLQV
LEDGRLTDSKGRLVDFRNTVLIMTSNVGASELKQNKYVGFSMGEADQDYKDMKSKVTDALKKAFRPEFLNRIDETIVFHS
LEKKHMKDIVVLMAEELRKRLQEQEIDFTLSDAAIQHIADSGFDPEYGARPLRRAIQKNVEDLLSEELLKENIAKGQKVK
IDLDENKNYVVHTQQESTN
Nucleotide
Download Length: 2460 bp
>NTDB_id=419944 M662_RS00780 WP_008635846.1 144325..146784(+) (clpC) [Bacillus sp. SB49]
ATGATGTTTGGGCGATTTACAGAAAGAGCACAAAAAGTTTTGGCACTGGCACAAGAGGAAGCAGTACGCTTAGGTCATAA
TAATATCGGGACGGAACACATCCTGCTTGGTTTAGTGAGTGAAGGGGAGGGAATTGCTGCGAAAGCTCTGACAGCTCTCG
GCCTTGAATCCTCCAAAATCCAACAGGAAGTGGAGAAACTGATCGGTAAAGGGGAAAAGGTATCCCAAACGATCCACTAT
ACTCCAAGAGCTAAGAAGGTCATAGAATTGTCTATGGATGAAGCTCGTAAGCTGGGACATTCATATGTAGGGACAGAGCA
CATTCTCCTTGGTTTAATCCGAGAAGGAGAAGGGGTAGCGGCCCGCGTTCTTAACAACCTTGGTGTAAGCCTTAATAAAG
CCCGTCAGCAAGTATTGCAGCTGCTTGGGAACAATGAGTCTACAGGCGGTCAAAATCGTCGTGGAGGCGCTTCTGGAGGA
CAGGCGACGAATGCGAATACACCAACCCTTGACTCCCTGGCCCGTGATTTGACGGCCATAGCTAAAGAAGGAAATATTGA
TCCTGTAATCGGCCGAAGCAAAGAGATTGAAAGGGTCATTCAAGTCTTGAGCCGCCGTACAAAGAACAACCCGGTGCTTG
TAGGTGAACCTGGTGTTGGTAAGACGGCCATCGCAGAGGGCTTGGCTCAGCAGATTATGAACAACGAAGTACCTGAAATT
CTGCGTGATAAGCGAGTCATGACGTTGGATATGGGTACAGTCGTCGCGGGAACGAAATACCGCGGGGAGTTTGAAGATCG
CTTGAAAAAAGTGATGGAAGAAATCCGCCAGGCGGGTAACATCATTCTATTCATCGATGAACTCCATACATTGATCGGTG
CCGGAGGAGCAGAAGGAGCCATTGATGCATCCAATATTCTGAAGCCTTCTCTTGCCCGGGGTGAACTGCAGTGTATCGGT
GCGACAACCCTTGATGAGTACCGTAAATATATTGAAAAAGATGCAGCACTTGAGCGTAGATTCCAACCGATTAAGGTGGA
TGAACCGACGCTTGATGAGTCCATTCAAATTTTGAAAGGTCTGCGTGACCGTTATGAAGCTCACCACCGTGTGACCATTA
CGGATGATTCTATTGAATCAGCTGTCCGTTTCTCCGACCGGTATATCACGGACCGCTTCCTTCCGGATAAAGCGATTGAT
TTAATCGATGAGGCAGCTTCCAAGGTGCGCCTGCGCTCCTATACAGCGCCGCCAAATCTTAAAGAGCTGGAACAGAAGCT
TGAGGAAGTCCGGAAAGAGAAAGATGCGGCTGTCCAAAGTCAGGAGTTTGAAAAAGCAGCATCCCTTCGTGATAGCGAAC
AGCGTTTGAGAGATGAGCTGGAGGAGACGAAGGATGAGTGGAAAGAAAAACAAGGCCAGGAGGATTCAGAGGTAACGGTA
GAAGATATTGCTTCTGTCGTATCCACTTGGACCGGTGTTCCAGTTTCCAAAATGACGAAGGATGAAAGTGAGCGTCTTCT
TAACCTGGAAGAAACGCTTCATAACCGAGTAATCGGTCAGGAAGAAGCGGTCAAAGCTATTTCCAAAGCGATCCGTCGTG
CCCGAGCAGGGTTGAAGGATCCGAAACGCCCGATTGGTTCCTTCATATTCCTTGGACCTACCGGTGTAGGTAAAACAGAG
CTTGCTCGCGCGCTGGCAGAGAGCATGTTCGGTGAAGAGGATGCCATGATTCGAATCGATATGTCGGAGTACATGGAGAA
ACACAGCACGTCCCGTCTTGTAGGTTCTCCTCCGGGATATGTAGGATACGATGAAGGCGGTCAGTTGACGGAGAAGGTAA
GGAACAAACCATATTCTGTTGTACTTCTTGATGAAATTGAGAAGGCGCACCCGGAAGTCTTCAATATCCTGCTGCAAGTA
TTGGAGGACGGCCGTCTGACAGACTCTAAAGGACGTCTTGTTGATTTCCGAAATACCGTGTTGATCATGACATCCAACGT
GGGTGCTTCCGAATTAAAACAAAACAAATACGTCGGCTTCTCTATGGGTGAAGCGGATCAGGATTATAAAGACATGAAGT
CCAAAGTGACAGATGCTTTGAAGAAAGCGTTCCGTCCTGAATTCCTAAACCGTATTGACGAAACAATTGTTTTCCACTCC
CTTGAGAAGAAGCACATGAAGGATATTGTCGTTCTTATGGCAGAAGAATTGCGTAAACGTCTGCAGGAGCAGGAGATCGA
CTTCACACTCTCGGATGCAGCTATCCAGCACATCGCAGATTCCGGATTCGACCCCGAATATGGGGCACGTCCATTGCGCC
GTGCTATACAGAAGAATGTCGAAGATCTTCTATCAGAGGAATTGCTTAAAGAGAATATCGCTAAAGGTCAAAAAGTTAAA
ATTGATCTGGATGAAAACAAGAATTATGTGGTGCATACACAACAAGAATCCACAAATTAA
ATGATGTTTGGGCGATTTACAGAAAGAGCACAAAAAGTTTTGGCACTGGCACAAGAGGAAGCAGTACGCTTAGGTCATAA
TAATATCGGGACGGAACACATCCTGCTTGGTTTAGTGAGTGAAGGGGAGGGAATTGCTGCGAAAGCTCTGACAGCTCTCG
GCCTTGAATCCTCCAAAATCCAACAGGAAGTGGAGAAACTGATCGGTAAAGGGGAAAAGGTATCCCAAACGATCCACTAT
ACTCCAAGAGCTAAGAAGGTCATAGAATTGTCTATGGATGAAGCTCGTAAGCTGGGACATTCATATGTAGGGACAGAGCA
CATTCTCCTTGGTTTAATCCGAGAAGGAGAAGGGGTAGCGGCCCGCGTTCTTAACAACCTTGGTGTAAGCCTTAATAAAG
CCCGTCAGCAAGTATTGCAGCTGCTTGGGAACAATGAGTCTACAGGCGGTCAAAATCGTCGTGGAGGCGCTTCTGGAGGA
CAGGCGACGAATGCGAATACACCAACCCTTGACTCCCTGGCCCGTGATTTGACGGCCATAGCTAAAGAAGGAAATATTGA
TCCTGTAATCGGCCGAAGCAAAGAGATTGAAAGGGTCATTCAAGTCTTGAGCCGCCGTACAAAGAACAACCCGGTGCTTG
TAGGTGAACCTGGTGTTGGTAAGACGGCCATCGCAGAGGGCTTGGCTCAGCAGATTATGAACAACGAAGTACCTGAAATT
CTGCGTGATAAGCGAGTCATGACGTTGGATATGGGTACAGTCGTCGCGGGAACGAAATACCGCGGGGAGTTTGAAGATCG
CTTGAAAAAAGTGATGGAAGAAATCCGCCAGGCGGGTAACATCATTCTATTCATCGATGAACTCCATACATTGATCGGTG
CCGGAGGAGCAGAAGGAGCCATTGATGCATCCAATATTCTGAAGCCTTCTCTTGCCCGGGGTGAACTGCAGTGTATCGGT
GCGACAACCCTTGATGAGTACCGTAAATATATTGAAAAAGATGCAGCACTTGAGCGTAGATTCCAACCGATTAAGGTGGA
TGAACCGACGCTTGATGAGTCCATTCAAATTTTGAAAGGTCTGCGTGACCGTTATGAAGCTCACCACCGTGTGACCATTA
CGGATGATTCTATTGAATCAGCTGTCCGTTTCTCCGACCGGTATATCACGGACCGCTTCCTTCCGGATAAAGCGATTGAT
TTAATCGATGAGGCAGCTTCCAAGGTGCGCCTGCGCTCCTATACAGCGCCGCCAAATCTTAAAGAGCTGGAACAGAAGCT
TGAGGAAGTCCGGAAAGAGAAAGATGCGGCTGTCCAAAGTCAGGAGTTTGAAAAAGCAGCATCCCTTCGTGATAGCGAAC
AGCGTTTGAGAGATGAGCTGGAGGAGACGAAGGATGAGTGGAAAGAAAAACAAGGCCAGGAGGATTCAGAGGTAACGGTA
GAAGATATTGCTTCTGTCGTATCCACTTGGACCGGTGTTCCAGTTTCCAAAATGACGAAGGATGAAAGTGAGCGTCTTCT
TAACCTGGAAGAAACGCTTCATAACCGAGTAATCGGTCAGGAAGAAGCGGTCAAAGCTATTTCCAAAGCGATCCGTCGTG
CCCGAGCAGGGTTGAAGGATCCGAAACGCCCGATTGGTTCCTTCATATTCCTTGGACCTACCGGTGTAGGTAAAACAGAG
CTTGCTCGCGCGCTGGCAGAGAGCATGTTCGGTGAAGAGGATGCCATGATTCGAATCGATATGTCGGAGTACATGGAGAA
ACACAGCACGTCCCGTCTTGTAGGTTCTCCTCCGGGATATGTAGGATACGATGAAGGCGGTCAGTTGACGGAGAAGGTAA
GGAACAAACCATATTCTGTTGTACTTCTTGATGAAATTGAGAAGGCGCACCCGGAAGTCTTCAATATCCTGCTGCAAGTA
TTGGAGGACGGCCGTCTGACAGACTCTAAAGGACGTCTTGTTGATTTCCGAAATACCGTGTTGATCATGACATCCAACGT
GGGTGCTTCCGAATTAAAACAAAACAAATACGTCGGCTTCTCTATGGGTGAAGCGGATCAGGATTATAAAGACATGAAGT
CCAAAGTGACAGATGCTTTGAAGAAAGCGTTCCGTCCTGAATTCCTAAACCGTATTGACGAAACAATTGTTTTCCACTCC
CTTGAGAAGAAGCACATGAAGGATATTGTCGTTCTTATGGCAGAAGAATTGCGTAAACGTCTGCAGGAGCAGGAGATCGA
CTTCACACTCTCGGATGCAGCTATCCAGCACATCGCAGATTCCGGATTCGACCCCGAATATGGGGCACGTCCATTGCGCC
GTGCTATACAGAAGAATGTCGAAGATCTTCTATCAGAGGAATTGCTTAAAGAGAATATCGCTAAAGGTCAAAAAGTTAAA
ATTGATCTGGATGAAAACAAGAATTATGTGGTGCATACACAACAAGAATCCACAAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
82.78 |
99.267 |
0.822 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
51.806 |
98.046 |
0.508 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.548 |
100 |
0.477 |
| clpC | Streptococcus thermophilus LMD-9 |
46.579 |
100 |
0.474 |
| clpC | Streptococcus pneumoniae Rx1 |
46.211 |
98.291 |
0.454 |
| clpC | Streptococcus pneumoniae D39 |
46.211 |
98.291 |
0.454 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.087 |
98.291 |
0.453 |
| clpC | Streptococcus mutans UA159 |
44.391 |
100 |
0.449 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
47.149 |
87.79 |
0.414 |
| clpE | Streptococcus mutans UA159 |
51.741 |
77.167 |
0.399 |
| clpE | Streptococcus pneumoniae Rx1 |
52.572 |
75.946 |
0.399 |
| clpE | Streptococcus pneumoniae D39 |
52.572 |
75.946 |
0.399 |
| clpE | Streptococcus pneumoniae R6 |
52.572 |
75.946 |
0.399 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.412 |
75.946 |
0.398 |