Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | GSF71_RS02160 | Genome accession | NZ_CP048116 |
| Coordinates | 443227..443532 (-) | Length | 101 a.a. |
| NCBI ID | WP_025016385.1 | Uniprot ID | A0AAX0VCA2 |
| Organism | Latilactobacillus sakei strain MBEL1397 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 438227..448532
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GSF71_RS02125 | - | 438666..439031 (+) | 366 | WP_011374991.1 | DUF805 domain-containing protein | - |
| GSF71_RS02135 | - | 439574..440032 (-) | 459 | WP_025016390.1 | hypothetical protein | - |
| GSF71_RS02140 | - | 440087..441283 (-) | 1197 | WP_025016389.1 | acetate/propionate family kinase | - |
| GSF71_RS02145 | - | 441305..442315 (-) | 1011 | WP_025016388.1 | class I SAM-dependent methyltransferase | - |
| GSF71_RS02150 | - | 442439..442777 (-) | 339 | WP_056947123.1 | hypothetical protein | - |
| GSF71_RS02155 | comGF | 442740..443252 (-) | 513 | WP_025016386.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| GSF71_RS02160 | comGE | 443227..443532 (-) | 306 | WP_025016385.1 | hypothetical protein | Machinery gene |
| GSF71_RS02165 | comGD | 443519..443971 (-) | 453 | WP_076648209.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| GSF71_RS02170 | comGC | 443943..444242 (-) | 300 | WP_076645268.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| GSF71_RS02175 | comGB | 444239..445246 (-) | 1008 | WP_076648212.1 | type II secretion system F family protein | Machinery gene |
| GSF71_RS02180 | comGA | 445239..446129 (-) | 891 | WP_076648214.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| GSF71_RS02185 | - | 446244..446975 (-) | 732 | WP_011375002.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| GSF71_RS02190 | - | 447066..447566 (-) | 501 | WP_016265379.1 | VanZ family protein | - |
| GSF71_RS02195 | - | 447663..448037 (+) | 375 | WP_076648217.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 101 a.a. Molecular weight: 11451.47 Da Isoelectric Point: 11.1577
>NTDB_id=419912 GSF71_RS02160 WP_025016385.1 443227..443532(-) (comGE) [Latilactobacillus sakei strain MBEL1397]
MFRSRPAFLLVENIIALTLVLGACWLLTVSLLHFKQQQTLKQQQVAQQAVLAMAAEQLRAHQTVKKRWQMGRTIYTVTAN
QQKLKVTTKAGESVAINWTTD
MFRSRPAFLLVENIIALTLVLGACWLLTVSLLHFKQQQTLKQQQVAQQAVLAMAAEQLRAHQTVKKRWQMGRTIYTVTAN
QQKLKVTTKAGESVAINWTTD
Nucleotide
Download Length: 306 bp
>NTDB_id=419912 GSF71_RS02160 WP_025016385.1 443227..443532(-) (comGE) [Latilactobacillus sakei strain MBEL1397]
ATGTTCAGAAGTAGGCCGGCTTTTTTACTCGTTGAAAATATCATCGCCTTAACCTTAGTATTAGGGGCTTGCTGGCTATT
AACGGTAAGTCTACTACACTTTAAGCAACAACAAACGCTTAAACAACAGCAAGTTGCACAACAGGCGGTTCTAGCAATGG
CCGCTGAGCAGTTGAGAGCGCATCAGACAGTGAAAAAACGCTGGCAAATGGGGCGAACAATCTATACGGTGACGGCTAAT
CAGCAGAAATTAAAGGTAACCACAAAGGCAGGTGAGTCGGTTGCGATTAATTGGACGACCGATTAA
ATGTTCAGAAGTAGGCCGGCTTTTTTACTCGTTGAAAATATCATCGCCTTAACCTTAGTATTAGGGGCTTGCTGGCTATT
AACGGTAAGTCTACTACACTTTAAGCAACAACAAACGCTTAAACAACAGCAAGTTGCACAACAGGCGGTTCTAGCAATGG
CCGCTGAGCAGTTGAGAGCGCATCAGACAGTGAAAAAACGCTGGCAAATGGGGCGAACAATCTATACGGTGACGGCTAAT
CAGCAGAAATTAAAGGTAACCACAAAGGCAGGTGAGTCGGTTGCGATTAATTGGACGACCGATTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Latilactobacillus sakei subsp. sakei 23K |
99.01 |
100 |
0.99 |