Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   HYC88_RS20250 Genome accession   NZ_CP061072
Coordinates   4714198..4715322 (-) Length   374 a.a.
NCBI ID   WP_003968311.1    Uniprot ID   B1VSK3
Organism   Streptomyces sp. CB00271     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4709198..4720322
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HYC88_RS20225 (HYC88_20225) cseB 4709512..4710225 (-) 714 WP_073806222.1 two-component system response regulator CseB -
  HYC88_RS20230 (HYC88_20230) - 4710290..4711003 (-) 714 WP_073806221.1 hypothetical protein -
  HYC88_RS20235 (HYC88_20235) - 4711165..4711836 (-) 672 WP_073806220.1 SigE family RNA polymerase sigma factor -
  HYC88_RS20240 (HYC88_20240) - 4712055..4712960 (-) 906 WP_047177250.1 A/G-specific adenine glycosylase -
  HYC88_RS20245 (HYC88_20245) - 4713264..4713998 (+) 735 WP_073806219.1 hypothetical protein -
  HYC88_RS20250 (HYC88_20250) disA 4714198..4715322 (-) 1125 WP_003968311.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  HYC88_RS20255 (HYC88_20255) radA/sms 4715402..4716823 (-) 1422 WP_073806218.1 DNA repair protein RadA Machinery gene
  HYC88_RS20260 (HYC88_20260) - 4716980..4718917 (+) 1938 WP_073806217.1 BACON domain-containing protein -
  HYC88_RS20265 (HYC88_20265) - 4718935..4719801 (-) 867 WP_073806216.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40408.36 Da        Isoelectric Point: 5.0230

>NTDB_id=419902 HYC88_RS20250 WP_003968311.1 4714198..4715322(-) (disA) [Streptomyces sp. CB00271]
MAANDRATTPGKSGQGTGNEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDMTKILRAGVQLVPDASIHTEETGTRHRTADRVSKACGFPVVSVSQSMRLIALYVDGERRVLEESSA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDALSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=419902 HYC88_RS20250 WP_003968311.1 4714198..4715322(-) (disA) [Streptomyces sp. CB00271]
GTGGCAGCCAACGACCGGGCGACGACGCCCGGAAAGTCCGGCCAAGGCACCGGTAACGAGGCGCTGATGCGCGCCTCGTT
GAGCGCGGTCGCCCCCGGAATGGCCCTGCGGGACGGCCTGGAGCGCATTCTCCGCGGCAATACCGGTGGGCTGATCGTGC
TGGGCATGGACAAGACCGTCGAGTCGATGTGCACCGGCGGATTCGTGCTGGACGTGGAGTTCACGGCGACGCGCCTGCGC
GAGCTGTGCAAGCTCGACGGGGCGCTGATCCTCGACAAGGACATGACCAAGATCCTGCGGGCCGGCGTGCAGCTGGTCCC
GGACGCCTCGATCCACACGGAGGAGACGGGCACCCGTCACCGTACGGCGGACCGGGTCTCCAAGGCGTGCGGCTTCCCCG
TCGTCTCGGTCTCCCAGTCGATGCGCCTGATCGCGCTGTACGTGGACGGGGAGCGGCGGGTCCTGGAGGAGTCCTCCGCC
ATCCTGTCCCGGGCCAATCAGGCGCTCGCCACGCTGGAGCGGTACAAACTGCGCCTCGACGAGGTGGCGGGCACGCTGTC
CGCCCTGGAGATCGAGGACCTGGTCACCGTCCGGGACGTGACGGCGGTGGCGCAGCGGCTGGAGATGGTGCGGCGGATCG
CCACGGAGATCGCGGAGTACGTGGTCGAGCTGGGCACCGACGGACGCCTGCTCTCCCTCCAGCTGGACGAGCTGATCGCG
GGTGTGGAGCCGGAGCGGGAGCTGGTCGTCCGGGACTACGTCCCCGAGCCGACGGCGAAGCGGTCGCGCACGGTGGCCGA
GGCGCTGACCGAGCTGGACGCGCTGAGCCATACGGAGCTGCTGGAGCTGCCGGTGGTGGCGCGGGCGCTGGGCTACAGCG
GCTCGCCGGAGACGCTGGACTCGGCGGTGTCGCCGCGGGGCTTCCGGCTGCTGGCGAAGGTGCCGAGGCTGCCGGGGGCG
ATCATCGAGCGGCTGGTGGAGCACTTCGGCGGTCTGCAGAAGCTGCTGGCGGCGAGCGTGGACGACCTCCAGACGGTGGA
CGGCGTCGGCGAAGCGCGGGCGCGCAGCGTGCGGGAGGGGCTTTCGCGGTTGGCGGAGTCGTCGATCCTGGAGCGGTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB B1VSK3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436