Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   IBL27_RS05630 Genome accession   NZ_CP061071
Coordinates   1127715..1129517 (-) Length   600 a.a.
NCBI ID   WP_019806057.1    Uniprot ID   -
Organism   Streptococcus mutans B04Sm5     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1122715..1134517
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IBL27_RS05605 (IBL27_05605) - 1123137..1123823 (-) 687 WP_002263646.1 response regulator transcription factor -
  IBL27_RS05610 (IBL27_05610) - 1123824..1124447 (-) 624 WP_002264331.1 GTP pyrophosphokinase -
  IBL27_RS05615 (IBL27_05615) - 1124677..1125123 (-) 447 WP_024781560.1 hypothetical protein -
  IBL27_RS05620 (IBL27_05620) tpx 1125289..1125774 (-) 486 WP_002263295.1 thiol peroxidase -
  IBL27_RS05625 (IBL27_05625) rcrQ 1125971..1127725 (-) 1755 WP_024784423.1 ABC transporter ATP-binding protein Regulator
  IBL27_RS05630 (IBL27_05630) rcrP 1127715..1129517 (-) 1803 WP_019806057.1 ABC transporter ATP-binding protein Regulator
  IBL27_RS05635 (IBL27_05635) rcrR 1129521..1129955 (-) 435 WP_002263292.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  IBL27_RS05640 (IBL27_05640) queC 1130507..1131160 (+) 654 WP_002309517.1 7-cyano-7-deazaguanine synthase QueC -
  IBL27_RS05645 (IBL27_05645) queD 1131160..1131606 (+) 447 WP_002266457.1 6-carboxytetrahydropterin synthase QueD -
  IBL27_RS05650 (IBL27_05650) queE 1131603..1132319 (+) 717 WP_002263289.1 7-carboxy-7-deazaguanine synthase QueE -
  IBL27_RS05655 (IBL27_05655) queF 1132332..1132820 (+) 489 WP_002265143.1 preQ(1) synthase -
  IBL27_RS05660 (IBL27_05660) - 1132929..1133312 (+) 384 WP_002270896.1 DUF3021 family protein -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 66940.75 Da        Isoelectric Point: 9.6552

>NTDB_id=419802 IBL27_RS05630 WP_019806057.1 1127715..1129517(-) (rcrP) [Streptococcus mutans B04Sm5]
MFKIFKRLNAKEWGMVLLSTAFICLAVWMDLKTPEYMSNITTLLQTKGTTASDIMDPGSKMLMFSFGSFFMAVLVGFLAS
RTAASFTTRLRSDIFNRVMDYSEVEIKKFSIPSLLTRTTNDLTQLQIMIVMGMQVVTRGPIMAVWALTKIWGKSDEWTGA
VGVAVLIVFIMLSVLMFVAFPRQRQVQSLTDALNSTTRESLTGVRVVRAYNAEDYQDTKFKRENKNLTKLNLLVYRLMSL
MNPVMTVVSSGLTLAIYWIGAYLLNDIKIPMTSATAAKGAIADRISVFSDMVVFSSYAMQVVVGFMMMVAIFIILPRALV
SAKRINEVLALNSSVHFKEYSKADNARKGEVEFHDVSFRYSKNSRAVIEHVSFSAKAGETVAFIGSTGSGKSTLVNLIPR
FYDATEGWIKIDGIKVQDYSHDDLNNKVGYIPQKAVLFSGTIRSNIAFGQSDQAPLDDAKIWEALELAQAKNFVEEKEKG
LDTEVAQGGTNFSGGQKQRLAIARALARKPEILIFDDSFSALDYKTDRILRNDLAKKTKEMTKLIVAQRISTIMDADHIL
VLDQGKVVGQGTHKELLANNDIYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=419802 IBL27_RS05630 WP_019806057.1 1127715..1129517(-) (rcrP) [Streptococcus mutans B04Sm5]
ATGTTTAAAATTTTTAAACGTCTAAATGCTAAAGAATGGGGCATGGTTCTCCTTAGTACTGCCTTTATCTGTTTGGCTGT
CTGGATGGATTTGAAGACGCCCGAATATATGTCCAACATTACAACCTTGCTGCAGACTAAGGGAACGACCGCCTCAGATA
TTATGGATCCGGGATCTAAGATGCTCATGTTTTCATTTGGAAGCTTTTTTATGGCCGTTCTAGTTGGTTTTTTAGCTTCA
AGAACAGCTGCCAGCTTTACGACCCGTCTTCGATCTGATATTTTCAACCGGGTTATGGATTATTCAGAGGTGGAAATCAA
GAAATTTTCCATTCCCAGCCTTCTAACGCGTACGACTAATGATTTGACACAGTTGCAAATCATGATCGTTATGGGAATGC
AAGTGGTGACACGCGGTCCAATCATGGCTGTTTGGGCCTTGACTAAAATCTGGGGTAAAAGCGATGAATGGACAGGAGCA
GTCGGTGTTGCTGTTTTAATTGTCTTTATTATGCTGTCTGTTTTGATGTTTGTCGCTTTTCCAAGACAGCGTCAGGTGCA
GAGCTTGACGGATGCTCTAAATTCTACAACCCGTGAATCTCTGACTGGTGTTCGTGTTGTTCGGGCTTACAATGCAGAAG
ATTATCAGGACACTAAATTTAAGCGGGAAAATAAAAACCTGACGAAATTGAATTTATTGGTCTATCGTCTGATGTCGCTA
ATGAATCCTGTCATGACAGTTGTTTCCAGTGGTCTAACTTTAGCTATTTATTGGATTGGAGCTTACCTGCTCAATGATAT
TAAAATTCCTATGACGAGTGCGACAGCTGCTAAAGGAGCTATTGCTGATCGTATCAGTGTTTTTAGTGATATGGTTGTCT
TTTCATCTTATGCCATGCAGGTTGTTGTCGGTTTTATGATGATGGTTGCTATCTTTATCATTTTACCGCGTGCTTTAGTT
TCTGCCAAACGAATTAATGAAGTATTGGCGCTTAACTCATCTGTACACTTCAAAGAATATTCTAAAGCAGACAATGCTCG
AAAAGGAGAAGTCGAATTTCATGATGTATCGTTTCGTTACAGTAAAAATTCTCGTGCGGTTATTGAGCATGTGTCTTTCA
GTGCTAAAGCTGGTGAGACAGTTGCTTTTATTGGCTCCACTGGCTCAGGAAAATCAACTCTTGTTAATCTGATTCCTCGT
TTTTATGATGCTACAGAAGGTTGGATTAAGATAGATGGAATCAAAGTGCAAGATTACAGCCATGATGACCTCAACAATAA
AGTCGGCTATATTCCGCAAAAGGCAGTGCTTTTTAGTGGGACCATTCGTTCTAATATTGCATTTGGGCAAAGCGATCAAG
CGCCGCTTGATGATGCTAAAATTTGGGAGGCTCTTGAACTAGCCCAAGCCAAAAACTTTGTTGAAGAAAAAGAAAAGGGT
CTGGATACCGAGGTAGCTCAAGGCGGTACCAACTTCTCTGGCGGTCAAAAGCAGCGCTTAGCTATTGCCCGTGCACTTGC
ACGCAAACCAGAAATTCTTATTTTTGATGACTCCTTCTCAGCTCTTGATTATAAGACGGATCGCATTCTGCGAAATGATT
TGGCAAAGAAAACCAAAGAAATGACTAAGTTGATTGTAGCCCAACGTATTTCAACTATTATGGATGCTGATCATATTTTA
GTCTTAGATCAAGGAAAGGTTGTTGGTCAAGGAACACACAAGGAATTACTGGCTAATAACGATATTTATCAAGAAATTGC
TTATTCACAACTATCTAAGGAGGAGTTAGAAAATGGAAAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(369-518)

ABC transporter transmembrane region (ABC_membrane)

(17-266)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

99.5

100

0.995