Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   IBL27_RS05625 Genome accession   NZ_CP061071
Coordinates   1125971..1127725 (-) Length   584 a.a.
NCBI ID   WP_024784423.1    Uniprot ID   -
Organism   Streptococcus mutans B04Sm5     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1120971..1132725
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IBL27_RS05595 (IBL27_05595) - 1121493..1121843 (+) 351 WP_002263648.1 DUF1304 domain-containing protein -
  IBL27_RS05600 (IBL27_05600) - 1121899..1123131 (-) 1233 WP_002285486.1 sensor histidine kinase -
  IBL27_RS05605 (IBL27_05605) - 1123137..1123823 (-) 687 WP_002263646.1 response regulator transcription factor -
  IBL27_RS05610 (IBL27_05610) - 1123824..1124447 (-) 624 WP_002264331.1 GTP pyrophosphokinase -
  IBL27_RS05615 (IBL27_05615) - 1124677..1125123 (-) 447 WP_024781560.1 hypothetical protein -
  IBL27_RS05620 (IBL27_05620) tpx 1125289..1125774 (-) 486 WP_002263295.1 thiol peroxidase -
  IBL27_RS05625 (IBL27_05625) rcrQ 1125971..1127725 (-) 1755 WP_024784423.1 ABC transporter ATP-binding protein Regulator
  IBL27_RS05630 (IBL27_05630) rcrP 1127715..1129517 (-) 1803 WP_019806057.1 ABC transporter ATP-binding protein Regulator
  IBL27_RS05635 (IBL27_05635) rcrR 1129521..1129955 (-) 435 WP_002263292.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  IBL27_RS05640 (IBL27_05640) queC 1130507..1131160 (+) 654 WP_002309517.1 7-cyano-7-deazaguanine synthase QueC -
  IBL27_RS05645 (IBL27_05645) queD 1131160..1131606 (+) 447 WP_002266457.1 6-carboxytetrahydropterin synthase QueD -
  IBL27_RS05650 (IBL27_05650) queE 1131603..1132319 (+) 717 WP_002263289.1 7-carboxy-7-deazaguanine synthase QueE -

Sequence

Protein


Download         Length: 584 a.a.        Molecular weight: 64535.54 Da        Isoelectric Point: 5.9195

>NTDB_id=419801 IBL27_RS05625 WP_024784423.1 1125971..1127725(-) (rcrQ) [Streptococcus mutans B04Sm5]
MENKKKSLLSQMAPYLKGYKALFGLAVIFTIVSSTITVIGPDRLKEMTDTMTKGLAGKIDLDKIGEIALTLALLYFAGAL
VSYTASFIVSTLIQKFSQRLRNAIADKINKVPLKYFDSHSQGDTLSRVTNDVDLMTQSFNQSLVSMVAAIILLIGSIFMM
IKTNGALAATAILSVFAGFVVSTVIMSKSQPLFKKQQANLADVSGYVEEVYSGHNVVSSYNAIQQSKKQFENLNDQLFAS
MWKSQFFSGIMMPLMQFIGNFGYVMVCIVGATMAINGDITMGTIVAFMTYVRIFTQPIAQIAQGITQLQSANAAMGRVFE
FLDEEEIEDENHKVKQLEKVEGNVNFGNVFFGYSPDKTIIHDFSAHAKAGQKIAIVGPTGAGKTTIVNLLMRFYEVDRGM
ISIDGVNIHDMTREEVHDAFAMVLQDTWLFEGTVKENLIYNQKHITDEQVIAAAKAVGVHHFIKTLPKGYDTVLDDSVTL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQRAMDHLMEGRTSFVIAHRLSTIRNADLILVMRDGNIIEQGS
HDQLMAENGFYADLYNSQFTEEVA

Nucleotide


Download         Length: 1755 bp        

>NTDB_id=419801 IBL27_RS05625 WP_024784423.1 1125971..1127725(-) (rcrQ) [Streptococcus mutans B04Sm5]
ATGGAAAATAAGAAGAAATCATTATTAAGCCAAATGGCTCCTTACCTTAAAGGCTATAAGGCTTTATTTGGACTTGCTGT
CATTTTTACTATCGTTTCAAGTACGATTACTGTTATTGGACCTGACCGGCTGAAAGAGATGACAGATACCATGACCAAAG
GGCTGGCAGGAAAAATTGATTTAGATAAAATCGGTGAGATTGCTCTAACCTTGGCTCTCTTATACTTTGCTGGTGCTTTG
GTTTCTTATACTGCTAGCTTTATTGTGTCCACTTTGATTCAAAAGTTTTCGCAACGTCTGCGCAATGCCATTGCAGATAA
AATCAATAAGGTACCGCTCAAATATTTTGACAGCCATTCACAAGGAGATACCTTGTCTCGAGTGACCAATGATGTGGATT
TAATGACACAGTCTTTCAACCAAAGTTTAGTTTCAATGGTAGCAGCTATAATTCTCCTGATTGGCTCTATTTTCATGATG
ATTAAAACCAATGGAGCTCTTGCAGCGACCGCTATTTTGTCTGTTTTTGCTGGTTTTGTGGTATCCACTGTTATCATGTC
CAAGAGTCAGCCGCTTTTTAAAAAGCAACAAGCTAATCTAGCCGATGTCAGCGGTTATGTTGAAGAGGTCTATTCAGGTC
ATAATGTGGTTTCTAGTTACAATGCGATTCAGCAAAGCAAGAAGCAGTTTGAAAACTTGAATGACCAATTATTTGCAAGT
ATGTGGAAATCACAATTCTTTTCTGGAATTATGATGCCCCTTATGCAATTCATCGGAAATTTTGGGTATGTCATGGTCTG
TATTGTCGGTGCTACCATGGCTATTAACGGCGATATTACTATGGGAACGATTGTTGCCTTTATGACTTACGTCCGTATTT
TTACTCAGCCCATTGCGCAGATTGCTCAAGGAATCACTCAATTGCAATCAGCTAATGCTGCTATGGGACGTGTCTTTGAA
TTTCTTGATGAGGAAGAAATAGAAGACGAAAACCATAAAGTTAAACAACTTGAAAAAGTTGAAGGAAATGTTAATTTTGG
CAATGTTTTCTTTGGTTATAGTCCTGATAAAACTATTATTCATGATTTCTCGGCTCATGCTAAGGCTGGTCAAAAAATTG
CTATTGTGGGACCGACTGGTGCGGGTAAGACAACGATTGTTAACTTACTTATGCGTTTCTATGAGGTTGATAGAGGGATG
ATTTCTATTGATGGAGTTAATATCCATGATATGACACGAGAAGAAGTGCATGATGCTTTTGCCATGGTACTCCAAGATAC
TTGGCTCTTTGAAGGTACAGTTAAGGAAAATCTGATTTATAATCAAAAACATATTACTGATGAGCAAGTGATTGCAGCAG
CTAAGGCAGTTGGTGTTCATCATTTCATCAAGACTTTACCTAAGGGTTATGATACTGTTTTAGATGATTCGGTCACCTTA
TCAGTCGGTCAAAAACAACTCTTGACCATTGCACGTGCTCTTCTTAAAGATGCACCGCTTCTGATTCTTGATGAAGCAAC
TTCCTCTGTTGATACTCGTACGGAAGAACTTATTCAAAGGGCTATGGATCATTTGATGGAGGGGCGGACATCATTCGTTA
TTGCCCATCGTCTGTCAACTATTCGCAATGCTGATCTTATTCTTGTCATGAGAGATGGTAATATTATTGAACAAGGCAGC
CATGACCAATTGATGGCAGAAAATGGCTTCTATGCCGATCTCTATAATAGTCAATTTACAGAAGAAGTGGCTTGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(361-508)

ABC transporter transmembrane region (ABC_membrane)

(24-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

99.315

100

0.993