Detailed information NTG0419759

Bioinformatically predicted

Overview

• Name: comB
• Type: Regulator
• Locus tag: IBL27_RS01355
• Genome accession: NZ_CP061071
• Coordinates: 271600..272613 (-)
• Length: 337 a.a.
• NCBI ID: WP_002309418.1
• Uniprot ID: -
• Organism: Streptococcus mutans B04Sm5
• Function: transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 266600..277613

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IBL27_RS01325 (IBL27_01325)	-	267084..267488 (+)	405	WP_002263912.1	hypothetical protein	-
IBL27_RS09845	-	267611..267823 (-)	213	Protein_238	IS3 family transposase	-
IBL27_RS01330 (IBL27_01330)	-	268263..268427 (+)	165	WP_002265308.1	hypothetical protein	-
IBL27_RS01335 (IBL27_01335)	-	268832..269044 (+)	213	WP_002309424.1	Blp family class II bacteriocin	-
IBL27_RS01340 (IBL27_01340)	-	269208..269396 (+)	189	WP_002309422.1	Blp family class II bacteriocin	-
IBL27_RS01345 (IBL27_01345)	-	269882..270904 (+)	1023	WP_002311309.1	thioredoxin family protein	-
IBL27_RS01350 (IBL27_01350)	-	271195..271338 (+)	144	WP_002263740.1	hypothetical protein	-
IBL27_RS01355 (IBL27_01355)	comB	271600..272613 (-)	1014	WP_002309418.1	HlyD family efflux transporter periplasmic adaptor subunit	Regulator
IBL27_RS01360 (IBL27_01360)	-	272626..274450 (-)	1825	Protein_245	peptide cleavage/export ABC transporter	-
IBL27_RS01365 (IBL27_01365)	-	274472..275689 (-)	1218	Protein_246	IS3 family transposase	-
IBL27_RS01370 (IBL27_01370)	-	275702..276148 (-)	447	Protein_247	cysteine peptidase family C39 domain-containing protein	-
IBL27_RS01375 (IBL27_01375)	-	276536..276790 (+)	255	WP_002267515.1	Blp family class II bacteriocin	-
IBL27_RS01380 (IBL27_01380)	-	276835..276996 (+)	162	WP_002263734.1	Blp family class II bacteriocin	-
IBL27_RS01385 (IBL27_01385)	-	277134..277319 (+)	186	WP_002263346.1	ComC/BlpC family leader-containing pheromone/bacteriocin	-

Sequence

Protein

• Length: 337 a.a.
• Molecular weight: 38449.05 Da
• Isoelectric Point: 10.6862

>NTDB_id=419759 IBL27_RS01355 WP_002309418.1 271600..272613(-) (comB) [Streptococcus mutans B04Sm5]
MNPNLFKSAEFYRRRYHNFATVLIIPLVCLLVFLFIFLLFAKKEVTVLSDGEISPIKVIDVIQSKSDYPISENNLTDNHA
VKKGDVLIQYVNPAANTRQGGNNQNQNQSQNKQNKNQQQNNKNQKNGNQSQKNQDQNQNKKDQKNNNQSQQNKQGQKKTN
QSQNQQNKNQNKNQSQNKQNGNQNQNNWNQNNQNDKVTASQDGVIHTNPKYEGENLIPRGTEIAQLYPDINKTRQVLITY
YVSSKDVTRLKQGQKTRLALTKVGNDQISIRGKINSIASAATTTKKGNVFKVTAKAKVSKKDSQTIKYGLQGKTITVVEK
KTFFDYYKDKLLNKNQK

Nucleotide

• Length: 1014 bp

>NTDB_id=419759 IBL27_RS01355 WP_002309418.1 271600..272613(-) (comB) [Streptococcus mutans B04Sm5]
ATGAACCCAAATTTATTTAAAAGCGCTGAATTCTACCGAAGACGCTATCATAATTTTGCTACAGTTCTTATTATTCCTTT
GGTTTGTTTACTTGTATTTTTATTTATCTTTCTATTATTTGCTAAAAAAGAGGTCACTGTCTTGTCTGATGGCGAGATCT
CTCCCATTAAAGTAATTGATGTTATTCAATCTAAAAGTGATTATCCCATTTCTGAAAATAATTTAACAGATAATCACGCC
GTTAAAAAAGGGGATGTTCTCATCCAATATGTTAATCCAGCAGCAAATACAAGACAGGGCGGAAATAATCAGAATCAAAA
TCAATCTCAAAACAAGCAAAATAAGAATCAGCAGCAAAACAATAAGAATCAAAAAAACGGCAATCAAAGTCAAAAAAATC
AAGATCAGAACCAAAATAAAAAGGATCAGAAAAACAATAACCAATCTCAGCAAAACAAGCAAGGACAAAAGAAAACTAAT
CAATCCCAAAATCAGCAGAATAAGAATCAAAATAAAAACCAATCTCAAAACAAACAAAATGGGAATCAAAACCAAAATAA
CTGGAATCAGAATAATCAAAATGATAAAGTCACAGCCAGCCAAGATGGTGTTATCCATACCAACCCCAAATATGAAGGTG
AAAACTTAATTCCTCGGGGGACTGAAATCGCACAGCTCTATCCAGATATTAACAAAACAAGACAAGTTCTGATCACTTAT
TACGTCTCCTCTAAAGATGTCACCCGCCTCAAACAAGGCCAAAAGACTCGTCTTGCTTTAACCAAGGTAGGAAATGATCA
AATTTCCATTAGAGGAAAAATTAATAGTATCGCTTCAGCTGCTACAACGACGAAAAAAGGCAATGTTTTTAAAGTGACAG
CTAAAGCAAAAGTTTCTAAAAAAGACAGCCAAACCATTAAATACGGCCTCCAGGGTAAAACCATCACAGTTGTTGAAAAA
AAGACTTTCTTTGATTATTATAAAGATAAACTGTTAAATAAAAATCAAAAATAA

Domains

Predicted by InterProScan.

• HlyD family secretion protein () (196-309)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comB	Streptococcus mutans UA159	98.813	100	0.988
comB/nlmE	Streptococcus mutans UA159	50.898	99.11	0.504