Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | GWK28_RS01620 | Genome accession | NZ_CP047973 |
| Coordinates | 348526..348951 (+) | Length | 141 a.a. |
| NCBI ID | WP_005127886.1 | Uniprot ID | A0A9E9MD02 |
| Organism | Acinetobacter baumannii strain DETAB-P2 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 343526..353951
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GWK28_RS01610 (GWK28_01610) | pilY1 | 344189..348034 (+) | 3846 | WP_032013894.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| GWK28_RS01615 (GWK28_01615) | pilY2 | 348047..348529 (+) | 483 | WP_001046423.1 | type IV pilin protein | Machinery gene |
| GWK28_RS01620 (GWK28_01620) | pilE | 348526..348951 (+) | 426 | WP_005127886.1 | type IV pilin protein | Machinery gene |
| GWK28_RS01625 (GWK28_01625) | rpsP | 349098..349349 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| GWK28_RS01630 (GWK28_01630) | rimM | 349369..349917 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| GWK28_RS01635 (GWK28_01635) | trmD | 349963..350703 (+) | 741 | WP_000464599.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| GWK28_RS01640 (GWK28_01640) | rplS | 350911..351279 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| GWK28_RS01645 (GWK28_01645) | - | 351332..352273 (-) | 942 | WP_097355459.1 | triacylglycerol lipase | - |
| GWK28_RS01650 (GWK28_01650) | - | 352388..353419 (-) | 1032 | WP_001189457.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15189.44 Da Isoelectric Point: 7.8144
>NTDB_id=418898 GWK28_RS01620 WP_005127886.1 348526..348951(+) (pilE) [Acinetobacter baumannii strain DETAB-P2]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSLQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSLQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=418898 GWK28_RS01620 WP_005127886.1 348526..348951(+) (pilE) [Acinetobacter baumannii strain DETAB-P2]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACATTAGAATCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTT
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCATTAT
CTGCTTCATCGAGTTGGACCGAGTAA
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACATTAGAATCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTT
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCATTAT
CTGCTTCATCGAGTTGGACCGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
90.071 |
100 |
0.901 |
| comF | Acinetobacter baylyi ADP1 |
50 |
99.291 |
0.496 |