Detailed information NTG0418897

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: GWK28_RS01615
• Genome accession: NZ_CP047973
• Coordinates: 348047..348529 (+)
• Length: 160 a.a.
• NCBI ID: WP_001046423.1
• Uniprot ID: A0A9E9MD39
• Organism: Acinetobacter baumannii strain DETAB-P2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 343047..353529

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GWK28_RS01605 (GWK28_01605)	pilX	343359..344177 (+)	819	WP_000149374.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene
GWK28_RS01610 (GWK28_01610)	pilY1	344189..348034 (+)	3846	WP_032013894.1	PilC/PilY family type IV pilus protein	Machinery gene
GWK28_RS01615 (GWK28_01615)	pilY2	348047..348529 (+)	483	WP_001046423.1	type IV pilin protein	Machinery gene
GWK28_RS01620 (GWK28_01620)	pilE	348526..348951 (+)	426	WP_005127886.1	type IV pilin protein	Machinery gene
GWK28_RS01625 (GWK28_01625)	rpsP	349098..349349 (+)	252	WP_000260334.1	30S ribosomal protein S16	-
GWK28_RS01630 (GWK28_01630)	rimM	349369..349917 (+)	549	WP_000189236.1	ribosome maturation factor RimM	-
GWK28_RS01635 (GWK28_01635)	trmD	349963..350703 (+)	741	WP_000464599.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
GWK28_RS01640 (GWK28_01640)	rplS	350911..351279 (+)	369	WP_000014562.1	50S ribosomal protein L19	-
GWK28_RS01645 (GWK28_01645)	-	351332..352273 (-)	942	WP_097355459.1	triacylglycerol lipase	-
GWK28_RS01650 (GWK28_01650)	-	352388..353419 (-)	1032	WP_001189457.1	lipase secretion chaperone	-

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17575.84 Da
• Isoelectric Point: 8.4834

>NTDB_id=418897 GWK28_RS01615 WP_001046423.1 348047..348529(+) (pilY2) [Acinetobacter baumannii strain DETAB-P2]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAVKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSAANGQTWVIRATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCEANSEVWQ

Nucleotide

• Length: 483 bp

>NTDB_id=418897 GWK28_RS01615 WP_001046423.1 348047..348529(+) (pilY2) [Acinetobacter baumannii strain DETAB-P2]
ATGAATAAATACTCTATTCTACGGTTCAATCAGGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGTTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTGCTAATGGTCAAAC
ATGGGTAATTAGAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGAACGACTACTTGTAATACATGTGAAGCGAACAGTGAGGTTTGGCAG
TGA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-127)

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	93.125	100	0.931
comE	Acinetobacter baylyi ADP1	38.953	100	0.419