Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | GWG03_RS13295 | Genome accession | NZ_CP047924 |
| Coordinates | 2696050..2696445 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain SR130 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2691050..2701445
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GWG03_RS13265 (GWG03_13315) | - | 2692308..2692712 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| GWG03_RS13270 (GWG03_13320) | - | 2693050..2693142 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| GWG03_RS13275 (GWG03_13325) | - | 2693274..2693507 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| GWG03_RS13280 (GWG03_13330) | murA | 2693618..2694883 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| GWG03_RS13285 (GWG03_13335) | fabZ | 2694917..2695357 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| GWG03_RS13290 (GWG03_13340) | - | 2695416..2695856 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| GWG03_RS13295 (GWG03_13345) | ssb | 2696050..2696445 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| GWG03_RS13300 (GWG03_13350) | sceD | 2696834..2697529 (+) | 696 | WP_000752005.1 | lytic transglycosylase SceD | - |
| GWG03_RS13305 (GWG03_13355) | tenA | 2697916..2698605 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| GWG03_RS13310 (GWG03_13360) | thiD | 2698598..2699428 (+) | 831 | WP_000594954.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| GWG03_RS13315 (GWG03_13365) | thiM | 2699412..2700203 (+) | 792 | WP_001108483.1 | hydroxyethylthiazole kinase | - |
| GWG03_RS13320 (GWG03_13370) | thiE | 2700205..2700846 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=418479 GWG03_RS13295 WP_000932694.1 2696050..2696445(+) (ssb) [Staphylococcus aureus strain SR130]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=418479 GWG03_RS13295 WP_000932694.1 2696050..2696445(+) (ssb) [Staphylococcus aureus strain SR130]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |