Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | GWG04_RS13855 | Genome accession | NZ_CP047922 |
| Coordinates | 2787029..2787424 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain SR231 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2782029..2792424
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GWG04_RS13825 (GWG04_13865) | - | 2783287..2783691 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| GWG04_RS13830 (GWG04_13870) | - | 2784029..2784121 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| GWG04_RS13835 (GWG04_13875) | - | 2784253..2784486 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| GWG04_RS13840 (GWG04_13880) | murA | 2784597..2785862 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| GWG04_RS13845 (GWG04_13885) | fabZ | 2785896..2786336 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| GWG04_RS13850 (GWG04_13890) | - | 2786395..2786835 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| GWG04_RS13855 (GWG04_13895) | ssb | 2787029..2787424 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| GWG04_RS13860 (GWG04_13900) | sceD | 2787813..2788508 (+) | 696 | WP_000752005.1 | lytic transglycosylase SceD | - |
| GWG04_RS13865 (GWG04_13905) | tenA | 2788895..2789584 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| GWG04_RS13870 (GWG04_13910) | thiD | 2789577..2790407 (+) | 831 | WP_000594954.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| GWG04_RS13875 (GWG04_13915) | thiM | 2790391..2791182 (+) | 792 | WP_001108483.1 | hydroxyethylthiazole kinase | - |
| GWG04_RS13880 (GWG04_13920) | thiE | 2791184..2791825 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=418435 GWG04_RS13855 WP_000932694.1 2787029..2787424(+) (ssb) [Staphylococcus aureus strain SR231]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=418435 GWG04_RS13855 WP_000932694.1 2787029..2787424(+) (ssb) [Staphylococcus aureus strain SR231]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |