Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   M594_RS05825 Genome accession   NZ_CP047883
Coordinates   1179339..1180148 (-) Length   269 a.a.
NCBI ID   WP_000004965.1    Uniprot ID   A0A501W4W0
Organism   Streptococcus mitis strain S022-V3-A4     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1174339..1185148
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M594_RS05810 (M594_05825) - 1175071..1176972 (-) 1902 WP_173876221.1 ABC-F family ATP-binding cassette domain-containing protein -
  M594_RS05815 (M594_05830) - 1177126..1178844 (+) 1719 WP_000121686.1 phospho-sugar mutase -
  M594_RS05820 (M594_05835) - 1178956..1179303 (+) 348 WP_000434637.1 thioredoxin -
  M594_RS05825 (M594_05840) vicX 1179339..1180148 (-) 810 WP_000004965.1 MBL fold metallo-hydrolase Regulator
  M594_RS05830 (M594_05845) micB 1180150..1181499 (-) 1350 WP_173876222.1 cell wall metabolism sensor histidine kinase VicK Regulator
  M594_RS05835 (M594_05850) micA 1181492..1182199 (-) 708 WP_000722072.1 response regulator YycF Regulator
  M594_RS05840 (M594_05855) mutY 1182255..1183430 (-) 1176 WP_173876223.1 A/G-specific adenine glycosylase -
  M594_RS05845 (M594_05860) pta 1183619..1184593 (-) 975 WP_000451571.1 phosphate acetyltransferase -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29932.91 Da        Isoelectric Point: 6.1743

>NTDB_id=418255 M594_RS05825 WP_000004965.1 1179339..1180148(-) (vicX) [Streptococcus mitis strain S022-V3-A4]
MSETGFKYSILASGSSGNSFYLETPKKKLLVDAGLSGKKITSLLAEINRKPEDLDAILITHEHSDHIHGVGVLARKYGMD
LYANEKTWQAMENSKYLGKVDSSQKHIFEMGKTKTFGDIDIESFGVSHDAVAPQFYRFMKDDKSFVMLTDTGYVSDRMAG
IVENADGYLIESNHDVEILRAGSYAWRLKQRILSDLGHLSNEDGAEAMIRTLGNRTKKIYLGHLSKENNIKELAHMTMVN
QLAQADLGVGVDFKVYDTSPDTATPLTEI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=418255 M594_RS05825 WP_000004965.1 1179339..1180148(-) (vicX) [Streptococcus mitis strain S022-V3-A4]
ATGAGTGAAACAGGCTTTAAATACAGTATTTTAGCGTCGGGTTCCAGTGGAAATTCCTTTTATCTGGAAACTCCAAAAAA
GAAGCTTTTAGTGGATGCAGGCTTGTCGGGCAAGAAAATTACCAGCTTACTTGCTGAAATAAATCGCAAACCAGAGGACT
TGGATGCCATCTTGATTACGCATGAGCATTCTGACCATATTCATGGAGTGGGTGTTTTGGCTCGCAAGTATGGTATGGAT
TTGTACGCCAATGAAAAGACCTGGCAGGCTATGGAAAATAGCAAGTATCTTGGCAAAGTGGATTCATCTCAGAAGCACAT
TTTTGAGATGGGTAAAACCAAAACCTTTGGAGATATCGACATTGAGAGTTTTGGTGTTAGCCATGATGCGGTTGCACCAC
AATTCTATCGCTTTATGAAGGATGATAAGAGTTTTGTCATGCTGACTGATACAGGTTATGTTAGTGATCGAATGGCAGGA
ATTGTCGAAAATGCAGATGGCTATCTTATCGAGTCCAACCATGATGTAGAGATTTTGCGAGCAGGTTCTTACGCTTGGCG
ACTCAAACAACGAATACTATCGGATCTGGGTCACCTTTCTAACGAGGACGGTGCTGAAGCTATGATTCGTACCTTGGGAA
ACCGCACTAAGAAGATCTACCTTGGGCATTTATCTAAGGAAAACAATATCAAGGAACTGGCTCACATGACCATGGTTAAT
CAGCTAGCACAAGCTGATCTAGGTGTAGGAGTAGACTTTAAGGTTTATGATACCTCACCGGATACCGCAACACCATTGAC
AGAGATATAA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A501W4W0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

78.067

100

0.781

Multiple sequence alignment