Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   M594_RS01965 Genome accession   NZ_CP047883
Coordinates   389833..390564 (+) Length   243 a.a.
NCBI ID   WP_050251578.1    Uniprot ID   A0A1X1KMH5
Organism   Streptococcus mitis strain S022-V3-A4     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 384833..395564
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M594_RS01940 (M594_01965) - 386500..386742 (+) 243 WP_173875827.1 hypothetical protein -
  M594_RS01945 (M594_01970) - 386813..387445 (+) 633 WP_173875828.1 DJ-1/PfpI family protein -
  M594_RS01950 (M594_01975) dnaJ 387642..388778 (+) 1137 WP_136936942.1 molecular chaperone DnaJ -
  M594_RS01955 (M594_01980) - 389058..389345 (-) 288 WP_000777752.1 hypothetical protein -
  M594_RS01960 (M594_01985) - 389355..389765 (-) 411 WP_001278317.1 HIT family protein -
  M594_RS01965 (M594_01990) pptA 389833..390564 (+) 732 WP_050251578.1 ABC transporter ATP-binding protein Regulator
  M594_RS01970 (M594_01995) - 390561..391610 (+) 1050 WP_173875829.1 ABC transporter permease -
  M594_RS01975 (M594_02000) - 391673..392002 (-) 330 WP_084947397.1 helicase BlpT -
  M594_RS01980 (M594_02005) comE/blpR 392298..393035 (+) 738 WP_173875830.1 response regulator transcription factor Regulator
  M594_RS01985 (M594_02010) - 393049..394398 (+) 1350 WP_173875831.1 sensor histidine kinase -
  M594_RS01990 (M594_02015) - 394467..394823 (+) 357 WP_120719177.1 hypothetical protein -
  M594_RS10085 - 395144..395224 (+) 81 WP_419991826.1 hypothetical protein -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27112.61 Da        Isoelectric Point: 4.7044

>NTDB_id=418243 M594_RS01965 WP_050251578.1 389833..390564(+) (pptA) [Streptococcus mitis strain S022-V3-A4]
MLEIKNLTGGYVHVPVLKDVSFTVESGQLVGLIGLNGAGKSTTINEIIGLLTPYSGSININGLTLQEDATSYRKQIGYIP
ETPSLYEELTLREHIETVAMAYGIEQKVAFERVEPLLKMFRLDQKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPLAIADLIQLLEVEKQKGKSILMSTHVLDSAEKMCDAFVILHKGEVRAKGNLLQLREAFDMPEASLNDIYLALTKE
EEL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=418243 M594_RS01965 WP_050251578.1 389833..390564(+) (pptA) [Streptococcus mitis strain S022-V3-A4]
ATGTTAGAAATTAAAAACCTGACAGGTGGCTATGTTCATGTTCCTGTCTTGAAAGATGTGTCCTTTACTGTTGAAAGTGG
GCAGCTGGTCGGTCTGATTGGTCTCAATGGTGCTGGGAAATCGACGACTATTAATGAGATTATCGGTCTGTTGACACCTT
ATAGTGGCTCCATCAATATCAATGGCTTGACCCTGCAAGAAGATGCAACGAGCTACCGCAAGCAAATTGGCTACATTCCT
GAGACGCCCAGCCTTTATGAGGAATTGACCCTCAGAGAGCATATCGAAACGGTTGCCATGGCTTATGGTATTGAGCAGAA
AGTGGCTTTTGAGAGAGTGGAGCCTTTGTTAAAAATGTTCCGTCTGGATCAGAAATTAGACTGGTTCCCTGTTCATTTTT
CAAAAGGGATGAAGCAGAAAGTCATGATTATCTGTGCTTTTGTGGTGGATCCGAGTCTCTTTATCGTGGATGAGCCTTTC
CTTGGTCTTGATCCGTTGGCTATTGCAGACTTGATTCAGCTTTTGGAAGTGGAAAAGCAAAAGGGTAAGTCTATTCTCAT
GAGTACTCACGTGCTGGATTCGGCGGAGAAGATGTGTGATGCCTTTGTCATTCTTCACAAGGGAGAGGTGCGTGCCAAGG
GGAATCTCCTGCAACTGCGCGAAGCCTTTGATATGCCTGAGGCCAGTTTGAATGATATTTACTTGGCTCTGACCAAAGAG
GAGGAGCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1X1KMH5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.614

99.177

0.72
  pptA Streptococcus thermophilus LMD-9

71.784

99.177

0.712

Multiple sequence alignment