Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   M594_RS01430 Genome accession   NZ_CP047883
Coordinates   278021..279088 (+) Length   355 a.a.
NCBI ID   WP_173875775.1    Uniprot ID   A0A6M9FBQ9
Organism   Streptococcus mitis strain S022-V3-A4     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 273021..284088
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M594_RS01415 (M594_01440) amiA 273544..275523 (+) 1980 WP_173875774.1 peptide ABC transporter substrate-binding protein Regulator
  M594_RS01420 (M594_01445) amiC 275590..277086 (+) 1497 WP_124788148.1 ABC transporter permease Regulator
  M594_RS01425 (M594_01450) amiD 277086..278012 (+) 927 WP_124788147.1 oligopeptide ABC transporter permease OppC Regulator
  M594_RS01430 (M594_01455) amiE 278021..279088 (+) 1068 WP_173875775.1 ABC transporter ATP-binding protein Regulator
  M594_RS01435 (M594_01460) amiF 279099..280025 (+) 927 WP_124788145.1 ATP-binding cassette domain-containing protein Regulator
  M594_RS01440 (M594_01465) - 280116..281555 (-) 1440 WP_173875776.1 TrkH family potassium uptake protein -
  M594_RS01445 (M594_01470) trkA 281559..282908 (-) 1350 WP_173875777.1 Trk system potassium transporter TrkA -
  M594_RS01450 (M594_01475) - 283097..283945 (+) 849 WP_001063590.1 SAM hydrolase/SAM-dependent halogenase family protein -

Sequence


Protein


Download         Length: 355 a.a.        Molecular weight: 39564.31 Da        Isoelectric Point: 4.7625

>NTDB_id=418241 M594_RS01430 WP_173875775.1 278021..279088(+) (amiE) [Streptococcus mitis strain S022-V3-A4]
MTKENNVILTARDIVVEFDVRDKVLTAIRGVSLDLIEGEVLALVGESGSGKSVLTKTFTGMLEDNGRIAQGSIDYRGQDL
TALASNKEWEKIRGAKIATIFQDPMTSLDPINTIGSQITEVIVKHQGKTAKEAKEMAIDYMKKVGIPEAEKRFEEYPFQY
SGGMRQRIVIAIALACRPDILICDEPTTALDVTIQAQIIDLLKTLQNEYHFTIIFITHDLGVVASIADKVAVMYAGEIVE
YGTVEEVFYDPRHPYTWSLLSSLPQLADDKGELYSIPGTPPSLYTELKGDAFALRSDYAMQIDFEQKAPKFPVSDTHWAK
TWLLHENAPKVEKPGVIADLHDKIRDKMGFAHLED

Nucleotide


Download         Length: 1068 bp        

>NTDB_id=418241 M594_RS01430 WP_173875775.1 278021..279088(+) (amiE) [Streptococcus mitis strain S022-V3-A4]
ATGACAAAAGAAAATAATGTAATATTGACTGCTCGCGATATTGTCGTGGAATTTGACGTTCGTGACAAAGTGTTAACGGC
TATCCGAGGAGTGTCTCTGGATTTGATTGAAGGGGAAGTTCTTGCCTTGGTAGGTGAGTCTGGTTCTGGTAAATCTGTAT
TAACAAAAACTTTTACAGGAATGTTAGAAGATAATGGGCGGATTGCTCAAGGAAGTATCGACTATCGTGGACAAGACTTG
ACTGCTCTGGCTTCTAACAAGGAGTGGGAGAAGATTCGTGGTGCTAAAATTGCGACCATCTTCCAAGATCCTATGACAAG
TTTGGATCCAATCAATACAATCGGTAGCCAAATTACAGAAGTTATCGTTAAACACCAAGGAAAAACAGCCAAGGAAGCTA
AAGAAATGGCAATCGACTATATGAAAAAAGTCGGAATTCCAGAAGCTGAGAAACGTTTTGAAGAATATCCTTTCCAATAT
TCGGGTGGGATGCGTCAACGTATTGTTATTGCGATAGCTCTTGCTTGTCGTCCAGATATCTTAATCTGTGATGAACCTAC
AACTGCCCTTGACGTAACTATTCAAGCACAAATTATTGATTTGCTTAAAACCTTGCAAAATGAGTACCACTTTACCATTA
TCTTTATCACACATGACCTTGGTGTGGTAGCAAGTATTGCAGATAAAGTAGCGGTTATGTACGCTGGGGAAATTGTAGAA
TATGGAACTGTTGAGGAAGTCTTCTACGACCCACGCCATCCATATACCTGGAGTCTCTTATCTAGCTTACCTCAGCTTGC
TGATGATAAAGGTGAATTATACTCTATCCCAGGAACACCGCCATCTCTTTATACTGAGTTGAAAGGTGATGCTTTTGCCC
TTCGTTCAGATTATGCTATGCAAATTGACTTTGAACAAAAAGCACCTAAGTTTCCTGTTAGTGATACTCACTGGGCTAAG
ACTTGGTTGCTTCATGAAAATGCTCCTAAAGTTGAAAAACCAGGAGTTATAGCAGATTTGCATGACAAGATTCGTGATAA
AATGGGCTTTGCTCATCTAGAAGACTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

85.915

100

0.859

  amiE Streptococcus thermophilus LMG 18311

83.944

100

0.839

  amiE Streptococcus thermophilus LMD-9

83.944

100

0.839

  oppD Streptococcus mutans UA159

54.545

99.155

0.541


Multiple sequence alignment