Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   M594_RS01380 Genome accession   NZ_CP047883
Coordinates   267593..268630 (+) Length   345 a.a.
NCBI ID   WP_033687316.1    Uniprot ID   A0A081PU74
Organism   Streptococcus mitis strain S022-V3-A4     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 262593..273630
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M594_RS01345 (M594_01370) yidC 262628..263554 (-) 927 WP_020901995.1 membrane protein insertase YidC -
  M594_RS01350 (M594_01375) - 263632..263910 (-) 279 WP_001174616.1 acylphosphatase -
  M594_RS01355 (M594_01380) - 263944..264684 (+) 741 WP_173875769.1 TrmH family RNA methyltransferase -
  M594_RS01360 (M594_01385) - 264739..265422 (+) 684 WP_001016903.1 Bax inhibitor-1 family protein -
  M594_RS01365 (M594_01390) asnA 265535..266527 (+) 993 WP_084947345.1 aspartate--ammonia ligase -
  M594_RS01370 (M594_01395) rsmD 266592..267131 (+) 540 WP_173875770.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  M594_RS01375 (M594_01400) coaD 267121..267609 (+) 489 WP_173875771.1 pantetheine-phosphate adenylyltransferase -
  M594_RS01380 (M594_01405) sepM 267593..268630 (+) 1038 WP_033687316.1 SepM family pheromone-processing serine protease Regulator
  M594_RS01385 (M594_01410) - 268688..268918 (+) 231 WP_000250399.1 DUF1146 family protein -
  M594_RS01390 (M594_01415) murA 268942..270225 (+) 1284 WP_173875772.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  M594_RS01395 (M594_01420) - 270218..270406 (+) 189 WP_004241151.1 DNA-directed RNA polymerase subunit beta -
  M594_RS01400 (M594_01425) endA 270445..271269 (+) 825 WP_000359015.1 DNA-entry nuclease EndA Machinery gene
  M594_RS01405 (M594_01430) - 271537..272868 (+) 1332 WP_173875773.1 hemolysin family protein -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37581.58 Da        Isoelectric Point: 4.8665

>NTDB_id=418236 M594_RS01380 WP_033687316.1 267593..268630(+) (sepM) [Streptococcus mitis strain S022-V3-A4]
MKKKIRWPLYVIAALIVTFLAFVVPLPYYIEVPGGSEDIRQVLKVNDTEDKEAGAYQFVTVGVQHATLAHMIYAWLTPFT
DIRSAQETTGGSSDVEFMRINQFYMQTSQNMAKYQGLKTAGKDIELKYLGVYVLTVTDNSTFKGILNISDTVTAVNDQTF
DSSKDLIDYVNSQKLGDSVKVTYEEDGQTKSAEGKIITLENGKNGIGIGLIDRTEVTSDVPIRFSTAGIGGPSAGLMFSL
AIYTQIADPGLRNGRIVAGTGTIDRDGNVGDIGGIDKKVVASAREGAAIFFAPDNPVSEEEQKAHPDAKNNYQTALEAAR
TIKTDMKIVPVKTLQDAIDYLKNNP

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=418236 M594_RS01380 WP_033687316.1 267593..268630(+) (sepM) [Streptococcus mitis strain S022-V3-A4]
ATGAAAAAAAAGATTAGATGGCCCTTATATGTCATTGCGGCCTTGATTGTGACTTTCTTGGCGTTTGTAGTGCCTTTGCC
TTATTATATAGAGGTTCCAGGTGGTTCGGAAGATATTCGCCAAGTCCTTAAAGTCAATGACACAGAAGATAAGGAAGCTG
GTGCCTATCAATTCGTTACGGTTGGTGTCCAGCATGCCACTTTAGCTCATATGATTTATGCATGGTTGACGCCTTTTACA
GATATTCGTAGTGCTCAGGAGACTACAGGTGGTTCTTCCGATGTTGAATTTATGCGGATCAATCAATTCTACATGCAAAC
ATCGCAAAATATGGCCAAGTATCAAGGGTTAAAAACAGCTGGTAAGGATATTGAACTCAAATATCTTGGGGTTTATGTCT
TGACTGTGACGGATAATTCGACCTTTAAAGGGATTCTCAACATTTCTGATACGGTCACAGCAGTCAATGATCAGACCTTT
GATAGTTCCAAAGACTTGATTGATTACGTCAATTCTCAAAAATTAGGGGATTCTGTCAAGGTCACCTATGAAGAAGATGG
GCAAACCAAGTCTGCAGAAGGAAAAATCATTACGCTAGAAAATGGCAAAAATGGAATTGGAATCGGCTTGATTGACCGTA
CAGAAGTAACCAGTGATGTCCCAATTCGCTTTTCAACAGCTGGTATTGGCGGTCCAAGTGCAGGTCTCATGTTTAGTCTG
GCCATCTATACTCAAATAGCTGACCCTGGTCTTCGTAATGGTCGTATCGTTGCCGGTACAGGTACCATTGATCGCGATGG
GAATGTGGGGGACATTGGAGGTATTGATAAGAAAGTTGTTGCTTCGGCTAGAGAAGGTGCTGCTATTTTCTTTGCCCCGG
ATAACCCTGTTAGCGAAGAAGAACAAAAAGCGCATCCTGATGCTAAAAACAACTACCAAACAGCCCTGGAAGCAGCTAGA
ACAATCAAGACAGATATGAAAATTGTTCCCGTTAAAACCCTACAAGATGCAATTGATTACTTGAAAAACAATCCCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A081PU74

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

59.357

99.13

0.588


Multiple sequence alignment