Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   E3S61_RS05570 Genome accession   NZ_CP047865
Coordinates   1102090..1103076 (-) Length   328 a.a.
NCBI ID   WP_000959282.1    Uniprot ID   A0A7U7EXT8
Organism   Staphylococcus aureus strain UP_844     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context


Location: 1097090..1108076
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3S61_RS05545 (E3S61_05545) - 1097350..1097697 (-) 348 WP_001242103.1 hypothetical protein -
  E3S61_RS05550 (E3S61_05550) - 1097883..1098476 (+) 594 WP_000224619.1 CYTH domain-containing protein -
  E3S61_RS05555 (E3S61_05555) - 1098580..1098945 (+) 366 WP_000214070.1 truncated hemoglobin YjbI -
  E3S61_RS05560 (E3S61_05560) yjbH 1098968..1099774 (+) 807 WP_000896697.1 protease adaptor protein YjbH -
  E3S61_RS05565 (E3S61_05565) pepF 1100234..1102042 (-) 1809 WP_000082725.1 oligoendopeptidase F -
  E3S61_RS05570 (E3S61_05570) coiA 1102090..1103076 (-) 987 WP_000959282.1 competence protein CoiA Machinery gene
  E3S61_RS05575 (E3S61_05575) mecA 1103197..1103916 (-) 720 WP_001217728.1 adaptor protein MecA -
  E3S61_RS05580 (E3S61_05580) spxA 1104287..1104682 (-) 396 WP_000258003.1 transcriptional regulator SpxA -
  E3S61_RS05585 (E3S61_05585) trpS 1104976..1105965 (+) 990 WP_000448934.1 tryptophan--tRNA ligase -
  E3S61_RS05590 (E3S61_05590) opp4C 1106007..1106888 (-) 882 WP_001180280.1 oligopeptide ABC transporter permease -
  E3S61_RS05595 (E3S61_05595) opp4B 1106900..1107862 (-) 963 WP_000915997.1 oligopeptide ABC transporter permease -

Sequence


Protein


Download         Length: 328 a.a.        Molecular weight: 38878.55 Da        Isoelectric Point: 9.5714

>NTDB_id=418111 E3S61_RS05570 WP_000959282.1 1102090..1103076(-) (coiA) [Staphylococcus aureus strain UP_844]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNETIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFHSLFINPITRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKIIELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVYNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLVNDNLNYFKLKKFIVALESKTAIIEKLINNYLNICSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=418111 E3S61_RS05570 WP_000959282.1 1102090..1103076(-) (coiA) [Staphylococcus aureus strain UP_844]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGTGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCTGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAAACGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCATAGTTTGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTCGCTGA
AAAAAGGAATGCCAAAATTATTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGTACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAATGACAATCTTAATTATTTTAAACTGAAAA
AATTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7U7EXT8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

100

100

1

  coiA Staphylococcus aureus MW2

97.561

100

0.976


Multiple sequence alignment