Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | E3S65_RS13720 | Genome accession | NZ_CP047859 |
| Coordinates | 2755705..2756100 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain UP_1405 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2750705..2761100
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3S65_RS13690 (E3S65_13690) | - | 2751963..2752367 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| E3S65_RS13695 (E3S65_13695) | - | 2752705..2752797 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| E3S65_RS13700 (E3S65_13700) | - | 2752929..2753162 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| E3S65_RS13705 (E3S65_13705) | murA | 2753273..2754538 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| E3S65_RS13710 (E3S65_13710) | fabZ | 2754572..2755012 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| E3S65_RS13715 (E3S65_13715) | - | 2755071..2755511 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| E3S65_RS13720 (E3S65_13720) | ssb | 2755705..2756100 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| E3S65_RS13725 (E3S65_13725) | sceD | 2756489..2757184 (+) | 696 | WP_000752005.1 | lytic transglycosylase SceD | - |
| E3S65_RS13730 (E3S65_13730) | tenA | 2757571..2758260 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| E3S65_RS13735 (E3S65_13735) | thiD | 2758253..2759083 (+) | 831 | WP_000594954.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| E3S65_RS13740 (E3S65_13740) | thiM | 2759067..2759858 (+) | 792 | WP_001108483.1 | hydroxyethylthiazole kinase | - |
| E3S65_RS13745 (E3S65_13745) | thiE | 2759860..2760501 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=417996 E3S65_RS13720 WP_000932694.1 2755705..2756100(+) (ssb) [Staphylococcus aureus strain UP_1405]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=417996 E3S65_RS13720 WP_000932694.1 2755705..2756100(+) (ssb) [Staphylococcus aureus strain UP_1405]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |