Detailed information NTG0417983

Bioinformatically predicted

Overview

• Name: luxO
• Type: Regulator
• Locus tag: H9199_RS00330
• Genome accession: NZ_CP060933
• Coordinates: 59740..61149 (+)
• Length: 469 a.a.
• NCBI ID: WP_001188777.1
• Uniprot ID: Q32A39
• Organism: Escherichia coli strain EC12
• Function: promote HapR production (predicted from homology) Competence regulation

Genomic Context

Location: 54740..66149

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H9199_RS00315 (H9199_00310)	typA	54755..56578 (-)	1824	WP_000570668.1	ribosome-dependent GTPase TypA	-
H9199_RS00320 (H9199_00315)	glnA	56951..58360 (+)	1410	WP_001271717.1	glutamate--ammonia ligase	-
H9199_RS00325 (H9199_00320)	glnL	58679..59728 (+)	1050	WP_000190580.1	nitrogen regulation protein NR(II)	-
H9199_RS00330 (H9199_00325)	luxO	59740..61149 (+)	1410	WP_001188777.1	nitrogen regulation protein NR(I)	Regulator
H9199_RS00335 (H9199_00330)	yshB	61261..61371 (+)	111	WP_000893994.1	YshB family small membrane protein	-
H9199_RS00340 (H9199_00335)	hemN	61561..62934 (-)	1374	WP_000116090.1	oxygen-independent coproporphyrinogen III oxidase	-
H9199_RS00345 (H9199_00340)	yihI	63123..63632 (-)	510	WP_001295266.1	Der GTPase-activating protein YihI	-
H9199_RS00350	-	63751..63917 (-)	167	Protein_70	hypothetical protein	-

Sequence

Protein

• Length: 469 a.a.
• Molecular weight: 52254.74 Da
• Isoelectric Point: 6.4561

>NTDB_id=417983 H9199_RS00330 WP_001188777.1 59740..61149(+) (luxO) [Escherichia coli strain EC12]
MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGAEVLEALASKTPDVLLSDIRMPGMDGLALLKQIKQRHPMLPVII
MTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAISHYQEQQQPRNVQLNGPTTDIIGEAPAMQDVFRIIGRLSRS
SISVLINGESGTGKELVAHALHRHSPRAKAPFIALNMAAIPKDLIESELFGHEKGAFTGANTIRQGRFEQADGGTLFLDE
IGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLEQRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPR
LARHFLQVAARELGVEAKLLHPETEAALTRLAWPGNVRQLENTCRWLTVMAAGQEVLIQDLPGELFESTVAESTSQMQPD
SWATLLAQWADRALRSGHQNLLSEAQPELERTLLTTALRHTQGHKQEAARLLGWGRNTLTRKLKELGME

Nucleotide

• Length: 1410 bp

>NTDB_id=417983 H9199_RS00330 WP_001188777.1 59740..61149(+) (luxO) [Escherichia coli strain EC12]
ATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGTTGGGTGCTTGAACGTGCGCTCGCTGGGGCAGG
TTTAACCTGTACGACGTTTGAGAACGGCGCAGAAGTGCTGGAGGCGCTGGCGAGCAAAACGCCGGATGTGCTGCTTTCAG
ATATCCGTATGCCGGGAATGGACGGGCTGGCGCTGCTCAAGCAGATTAAACAGCGCCATCCAATGCTTCCGGTCATCATT
ATGACCGCACATTCCGATCTGGATGCTGCCGTCAGCGCCTATCAACAAGGGGCGTTTGATTATCTGCCCAAACCGTTTGA
TATCGACGAAGCAGTGGCGCTGGTTGAGCGCGCTATCAGTCATTACCAGGAACAGCAGCAGCCGCGTAATGTTCAGCTTA
ACGGCCCAACGACCGATATCATCGGCGAAGCGCCAGCCATGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCT
TCTATTAGCGTGCTGATTAACGGCGAATCCGGCACCGGTAAAGAACTGGTCGCTCATGCCCTGCATCGCCACAGTCCGCG
CGCCAAAGCGCCGTTTATCGCGCTGAATATGGCAGCTATCCCAAAAGATTTGATCGAATCAGAACTGTTTGGCCACGAGA
AAGGCGCGTTTACTGGCGCGAATACCATTCGTCAGGGGCGTTTTGAACAGGCCGATGGCGGTACATTATTCCTCGACGAA
ATTGGTGATATGCCGCTGGATGTGCAGACGCGTTTGCTGCGCGTGCTGGCAGACGGTCAGTTTTACCGCGTTGGCGGCTA
TGCGCCGGTGAAAGTGGATGTGCGGATTATCGCTGCCACTCACCAGAATCTCGAACAGCGAGTGCAGGAAGGTAAGTTCC
GTGAGGATCTGTTCCACCGCCTGAACGTTATCCGCGTTCATCTGCCGCCGCTGCGCGAACGTCGGGAAGATATTCCCCGT
CTGGCGCGCCATTTTTTACAGGTTGCCGCGCGCGAACTGGGCGTAGAAGCGAAGTTGCTGCATCCGGAAACCGAAGCTGC
TCTGACGCGTCTGGCGTGGCCAGGCAACGTACGCCAGCTGGAAAACACCTGCCGCTGGCTAACGGTGATGGCCGCCGGGC
AGGAAGTGTTGATTCAGGATTTGCCCGGCGAACTGTTTGAATCAACGGTTGCGGAGAGTACTTCGCAAATGCAACCGGAC
AGTTGGGCGACACTTTTAGCGCAGTGGGCAGACAGAGCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGCC
AGAGCTGGAGCGGACGTTACTGACGACCGCGTTGCGACATACGCAGGGGCATAAACAGGAAGCGGCGCGGCTACTCGGCT
GGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGATGGAGTGA

Domains

Predicted by InterProScan.

• Bacterial regulatory protein, Fis family (HTH_8) (427-466)

• Response regulator receiver domain (Response_reg) (6-115)

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

3D structure

• AlphaFold DB: Q32A39

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxO	Vibrio cholerae strain A1552	39.871	98.934	0.394
pilR	Pseudomonas aeruginosa PAK	39.066	100	0.392