Detailed information
Bioinformatically predicted
Overview
| Name | pepF | Type | Regulator |
| Locus tag | WKK_RS06215 | Genome accession | NC_015759 |
| Coordinates | 1267069..1268874 (+) | Length | 601 a.a. |
| NCBI ID | WP_013989793.1 | Uniprot ID | - |
| Organism | Weissella koreensis KACC 15510 | ||
| Function | degradation of XIP; competence shut-off (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1262069..1273874
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WKK_RS06190 (WKK_06010) | - | 1262735..1263577 (+) | 843 | WP_013989789.1 | YitT family protein | - |
| WKK_RS06195 (WKK_06015) | - | 1263626..1264375 (+) | 750 | WP_013989790.1 | DnaD domain protein | - |
| WKK_RS06200 (WKK_06020) | - | 1264395..1264898 (+) | 504 | WP_006845237.1 | MscL family protein | - |
| WKK_RS07220 (WKK_06025) | - | 1264944..1265087 (+) | 144 | WP_006845238.1 | hypothetical protein | - |
| WKK_RS06205 (WKK_06030) | - | 1265151..1265870 (+) | 720 | WP_081461284.1 | adaptor protein MecA | - |
| WKK_RS06210 (WKK_06035) | - | 1265979..1267049 (+) | 1071 | WP_341348854.1 | competence protein CoiA family protein | - |
| WKK_RS06215 (WKK_06040) | pepF | 1267069..1268874 (+) | 1806 | WP_013989793.1 | oligoendopeptidase F | Regulator |
| WKK_RS06220 (WKK_06045) | glyQ | 1269224..1270150 (+) | 927 | WP_013989794.1 | glycine--tRNA ligase subunit alpha | - |
| WKK_RS06225 (WKK_06050) | glyS | 1270152..1272224 (+) | 2073 | WP_013989795.1 | glycine--tRNA ligase subunit beta | - |
| WKK_RS06230 (WKK_06055) | - | 1272382..1272849 (+) | 468 | WP_242821437.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| WKK_RS06235 (WKK_06060) | - | 1272953..1273492 (+) | 540 | WP_006845246.1 | NADPH-dependent FMN reductase | - |
Sequence
Protein
Download Length: 601 a.a. Molecular weight: 68219.00 Da Isoelectric Point: 4.1947
>NTDB_id=41787 WKK_RS06215 WP_013989793.1 1267069..1268874(+) (pepF) [Weissella koreensis KACC 15510]
MVKEIPIRSEVPTSQTWDLTTIFKDDQAFDAAVEDLNLRLELSDALAEKVSNSGQDLYQALQYGLSLMRDLEKVYVYASM
KSDQDTGNQYYQGLNAIAGNLAAQVSSAIAFFDPAVLSLSDQQLAEMFETEPRLKDYQHYFETILTQKGHVLSRESEELL
AGASEVFNASQNTFSILDNADMEFGAVENEDGEFEQLTNGVYSRLLESSNPTVRKNAFQTFYQSYAQLENTFGTLISGNV
KQQNFQAQVRNYQSAREAALAQNHIPEVVYDNLVETTHQALPLLHRYVALRKKMLKLPELHSYDLYTPILGTPDFDIDYE
SAKAMALEALKPMGDEYLSIMNDAFDERWIDVVENKGKRSGAYSGGSYDTNPFMLLNWVDNLNNLYTLVHEMGHSVHSYQ
TRNNQPYQYGDYPIFLAEIASTTNENLLTDYLLKTITDPQIRAYILNQYLDGFKGTMFRQTQFAEFEQWMHEQDASGVPL
TAEVLDDAYLDLNQEYYGPALTVDPEIAYEWARIPHFYYNFYVFQYSTGFAAATALAKQILHGGTEGVAAYMSYLQAGSS
DFPLEVIKKAGVDMAKTDYLQATFDVFEQRLNEFESIIDTL
MVKEIPIRSEVPTSQTWDLTTIFKDDQAFDAAVEDLNLRLELSDALAEKVSNSGQDLYQALQYGLSLMRDLEKVYVYASM
KSDQDTGNQYYQGLNAIAGNLAAQVSSAIAFFDPAVLSLSDQQLAEMFETEPRLKDYQHYFETILTQKGHVLSRESEELL
AGASEVFNASQNTFSILDNADMEFGAVENEDGEFEQLTNGVYSRLLESSNPTVRKNAFQTFYQSYAQLENTFGTLISGNV
KQQNFQAQVRNYQSAREAALAQNHIPEVVYDNLVETTHQALPLLHRYVALRKKMLKLPELHSYDLYTPILGTPDFDIDYE
SAKAMALEALKPMGDEYLSIMNDAFDERWIDVVENKGKRSGAYSGGSYDTNPFMLLNWVDNLNNLYTLVHEMGHSVHSYQ
TRNNQPYQYGDYPIFLAEIASTTNENLLTDYLLKTITDPQIRAYILNQYLDGFKGTMFRQTQFAEFEQWMHEQDASGVPL
TAEVLDDAYLDLNQEYYGPALTVDPEIAYEWARIPHFYYNFYVFQYSTGFAAATALAKQILHGGTEGVAAYMSYLQAGSS
DFPLEVIKKAGVDMAKTDYLQATFDVFEQRLNEFESIIDTL
Nucleotide
Download Length: 1806 bp
>NTDB_id=41787 WKK_RS06215 WP_013989793.1 1267069..1268874(+) (pepF) [Weissella koreensis KACC 15510]
ATGGTAAAAGAAATTCCAATCCGTTCAGAAGTGCCTACAAGCCAAACTTGGGACTTAACAACGATTTTTAAAGATGATCA
AGCTTTTGACGCTGCTGTTGAAGATTTGAATCTACGACTTGAATTATCAGATGCTTTGGCTGAAAAGGTGTCTAATTCTG
GTCAAGATTTATATCAAGCTCTACAATATGGTTTAAGCTTGATGCGTGATTTAGAAAAAGTATATGTGTATGCATCAATG
AAGTCTGATCAAGATACTGGTAATCAATATTATCAAGGCTTAAATGCAATTGCTGGAAATTTAGCGGCACAAGTATCAAG
TGCAATTGCCTTCTTTGATCCAGCAGTATTAAGTCTTTCGGATCAACAATTAGCTGAAATGTTTGAGACTGAGCCTAGAT
TAAAGGACTATCAACATTATTTTGAAACGATTCTAACGCAAAAAGGGCATGTTCTATCACGGGAAAGCGAAGAACTTTTG
GCTGGGGCTTCTGAAGTCTTTAATGCTTCGCAAAATACATTTAGTATTTTAGATAATGCGGATATGGAATTTGGAGCAGT
TGAAAATGAAGATGGTGAATTCGAACAATTGACGAATGGTGTTTATAGCCGCTTGTTAGAGTCGTCTAATCCAACAGTCC
GTAAAAATGCTTTTCAAACTTTCTATCAATCTTATGCGCAATTAGAGAATACGTTTGGAACACTTATTAGTGGAAATGTT
AAACAACAAAATTTTCAAGCGCAAGTTCGAAACTATCAATCAGCACGTGAAGCGGCCTTGGCACAAAATCATATTCCAGA
AGTTGTTTATGATAATTTGGTTGAAACTACACATCAAGCCTTGCCTCTGTTACATCGTTATGTAGCACTTCGTAAAAAAA
TGTTGAAGTTACCTGAATTACATTCATATGATTTGTATACACCTATTTTAGGAACACCTGATTTTGATATCGACTATGAA
TCAGCTAAGGCGATGGCTTTGGAAGCTCTGAAGCCTATGGGTGATGAATATCTATCAATTATGAATGATGCCTTTGATGA
ACGTTGGATTGACGTTGTTGAAAATAAAGGGAAACGTAGTGGAGCATATTCGGGAGGATCGTATGATACCAATCCTTTCA
TGCTATTAAATTGGGTGGATAATTTAAATAATTTGTACACCCTGGTTCATGAAATGGGACATTCGGTTCATAGTTATCAA
ACTCGAAATAATCAACCTTATCAATATGGAGATTACCCAATCTTTTTAGCTGAGATCGCTTCAACTACCAATGAGAATCT
ATTAACTGATTATTTGTTAAAGACAATTACGGATCCACAAATTCGAGCTTATATCTTGAATCAATACCTAGATGGATTTA
AGGGAACTATGTTTAGGCAAACTCAATTTGCTGAATTTGAGCAATGGATGCACGAACAGGATGCAAGTGGGGTACCTTTA
ACGGCAGAAGTTCTTGATGATGCGTATCTGGATTTGAATCAAGAATATTATGGTCCAGCGTTGACCGTTGATCCAGAAAT
TGCATATGAGTGGGCTCGTATTCCACACTTCTATTACAATTTCTATGTATTTCAATATTCGACTGGCTTCGCTGCAGCGA
CGGCCTTAGCAAAGCAAATTTTGCATGGAGGAACTGAAGGAGTGGCTGCTTATATGAGCTATCTACAAGCTGGTTCATCA
GATTTTCCATTGGAAGTTATTAAAAAAGCTGGCGTTGATATGGCTAAAACGGATTATTTACAAGCAACCTTTGACGTCTT
TGAACAACGTCTAAATGAATTTGAATCTATTATTGATACGCTTTAA
ATGGTAAAAGAAATTCCAATCCGTTCAGAAGTGCCTACAAGCCAAACTTGGGACTTAACAACGATTTTTAAAGATGATCA
AGCTTTTGACGCTGCTGTTGAAGATTTGAATCTACGACTTGAATTATCAGATGCTTTGGCTGAAAAGGTGTCTAATTCTG
GTCAAGATTTATATCAAGCTCTACAATATGGTTTAAGCTTGATGCGTGATTTAGAAAAAGTATATGTGTATGCATCAATG
AAGTCTGATCAAGATACTGGTAATCAATATTATCAAGGCTTAAATGCAATTGCTGGAAATTTAGCGGCACAAGTATCAAG
TGCAATTGCCTTCTTTGATCCAGCAGTATTAAGTCTTTCGGATCAACAATTAGCTGAAATGTTTGAGACTGAGCCTAGAT
TAAAGGACTATCAACATTATTTTGAAACGATTCTAACGCAAAAAGGGCATGTTCTATCACGGGAAAGCGAAGAACTTTTG
GCTGGGGCTTCTGAAGTCTTTAATGCTTCGCAAAATACATTTAGTATTTTAGATAATGCGGATATGGAATTTGGAGCAGT
TGAAAATGAAGATGGTGAATTCGAACAATTGACGAATGGTGTTTATAGCCGCTTGTTAGAGTCGTCTAATCCAACAGTCC
GTAAAAATGCTTTTCAAACTTTCTATCAATCTTATGCGCAATTAGAGAATACGTTTGGAACACTTATTAGTGGAAATGTT
AAACAACAAAATTTTCAAGCGCAAGTTCGAAACTATCAATCAGCACGTGAAGCGGCCTTGGCACAAAATCATATTCCAGA
AGTTGTTTATGATAATTTGGTTGAAACTACACATCAAGCCTTGCCTCTGTTACATCGTTATGTAGCACTTCGTAAAAAAA
TGTTGAAGTTACCTGAATTACATTCATATGATTTGTATACACCTATTTTAGGAACACCTGATTTTGATATCGACTATGAA
TCAGCTAAGGCGATGGCTTTGGAAGCTCTGAAGCCTATGGGTGATGAATATCTATCAATTATGAATGATGCCTTTGATGA
ACGTTGGATTGACGTTGTTGAAAATAAAGGGAAACGTAGTGGAGCATATTCGGGAGGATCGTATGATACCAATCCTTTCA
TGCTATTAAATTGGGTGGATAATTTAAATAATTTGTACACCCTGGTTCATGAAATGGGACATTCGGTTCATAGTTATCAA
ACTCGAAATAATCAACCTTATCAATATGGAGATTACCCAATCTTTTTAGCTGAGATCGCTTCAACTACCAATGAGAATCT
ATTAACTGATTATTTGTTAAAGACAATTACGGATCCACAAATTCGAGCTTATATCTTGAATCAATACCTAGATGGATTTA
AGGGAACTATGTTTAGGCAAACTCAATTTGCTGAATTTGAGCAATGGATGCACGAACAGGATGCAAGTGGGGTACCTTTA
ACGGCAGAAGTTCTTGATGATGCGTATCTGGATTTGAATCAAGAATATTATGGTCCAGCGTTGACCGTTGATCCAGAAAT
TGCATATGAGTGGGCTCGTATTCCACACTTCTATTACAATTTCTATGTATTTCAATATTCGACTGGCTTCGCTGCAGCGA
CGGCCTTAGCAAAGCAAATTTTGCATGGAGGAACTGAAGGAGTGGCTGCTTATATGAGCTATCTACAAGCTGGTTCATCA
GATTTTCCATTGGAAGTTATTAAAAAAGCTGGCGTTGATATGGCTAAAACGGATTATTTACAAGCAACCTTTGACGTCTT
TGAACAACGTCTAAATGAATTTGAATCTATTATTGATACGCTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pepF | Streptococcus salivarius strain HSISS4 |
54.73 |
98.502 |
0.539 |