Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | E3S80_RS13335 | Genome accession | NZ_CP047847 |
| Coordinates | 2663246..2663641 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain UP_522 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2658246..2668641
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3S80_RS13305 (E3S80_13305) | - | 2659504..2659908 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| E3S80_RS13310 (E3S80_13310) | - | 2660246..2660338 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| E3S80_RS13315 (E3S80_13315) | - | 2660470..2660703 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| E3S80_RS13320 (E3S80_13320) | murA | 2660814..2662079 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| E3S80_RS13325 (E3S80_13325) | fabZ | 2662113..2662553 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| E3S80_RS13330 (E3S80_13330) | - | 2662612..2663052 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| E3S80_RS13335 (E3S80_13335) | ssb | 2663246..2663641 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| E3S80_RS13340 (E3S80_13340) | sceD | 2664029..2664724 (+) | 696 | WP_047928572.1 | lytic transglycosylase SceD | - |
| E3S80_RS13345 (E3S80_13345) | tenA | 2665248..2665937 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| E3S80_RS13350 (E3S80_13350) | thiD | 2665930..2666760 (+) | 831 | WP_000594960.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| E3S80_RS13355 (E3S80_13355) | thiM | 2666744..2667544 (+) | 801 | WP_001108492.1 | hydroxyethylthiazole kinase | - |
| E3S80_RS13360 (E3S80_13360) | thiE | 2667537..2668178 (+) | 642 | WP_000483155.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=417743 E3S80_RS13335 WP_000932694.1 2663246..2663641(+) (ssb) [Staphylococcus aureus strain UP_522]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=417743 E3S80_RS13335 WP_000932694.1 2663246..2663641(+) (ssb) [Staphylococcus aureus strain UP_522]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |