Detailed information NTG0417671

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: H9203_RS02135
• Genome accession: NZ_CP060914
• Coordinates: 433777..434760 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196496.1
• Uniprot ID: Q3YVS2
• Organism: Escherichia coli strain EC18
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 428777..439760

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H9203_RS02120 (H9203_02075)	dppA	430077..431684 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
H9203_RS02125 (H9203_02080)	dppB	431835..432854 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
H9203_RS02130 (H9203_02085)	dppC	432864..433766 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
H9203_RS02135 (H9203_02090)	amiE	433777..434760 (+)	984	WP_001196496.1	dipeptide ABC transporter ATP-binding protein	Regulator
H9203_RS02140 (H9203_02095)	dppF	434757..435761 (+)	1005	WP_000107035.1	dipeptide ABC transporter ATP-binding subunit DppF	-
H9203_RS02145 (H9203_02100)	yhjV	435791..437062 (-)	1272	WP_001307456.1	aromatic amino acid transport family protein	-
H9203_RS02150 (H9203_02105)	-	437538..437645 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
H9203_RS02155 (H9203_02110)	-	438021..438128 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
H9203_RS02160 (H9203_02115)	-	438504..438611 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35814.38 Da
• Isoelectric Point: 6.7584

>NTDB_id=417671 H9203_RS02135 WP_001196496.1 433777..434760(+) (amiE) [Escherichia coli strain EC18]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=417671 H9203_RS02135 WP_001196496.1 433777..434760(+) (amiE) [Escherichia coli strain EC18]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTTGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCCCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAACTGGTGTTTAACGGTCAGGATTTGCAGCGTATCTCGGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCTTCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAGCCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTGTTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCGCATGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCATCGTTGCCTGGCGTCGTTCCCGGCAAGTACGATCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCCACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: Q3YVS2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401