Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | E3S84_RS12995 | Genome accession | NZ_CP047841 |
| Coordinates | 2620492..2620887 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain UP_644 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2615492..2625887
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3S84_RS12965 (E3S84_12965) | - | 2616750..2617154 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| E3S84_RS12970 (E3S84_12970) | - | 2617492..2617584 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| E3S84_RS12975 (E3S84_12975) | - | 2617716..2617949 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| E3S84_RS12980 (E3S84_12980) | murA | 2618060..2619325 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| E3S84_RS12985 (E3S84_12985) | fabZ | 2619359..2619799 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| E3S84_RS12990 (E3S84_12990) | - | 2619858..2620298 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| E3S84_RS12995 (E3S84_12995) | ssb | 2620492..2620887 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| E3S84_RS13000 (E3S84_13000) | sceD | 2621275..2621970 (+) | 696 | WP_047928572.1 | lytic transglycosylase SceD | - |
| E3S84_RS13005 (E3S84_13005) | tenA | 2622494..2623183 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| E3S84_RS13010 (E3S84_13010) | thiD | 2623176..2624006 (+) | 831 | WP_000594960.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| E3S84_RS13015 (E3S84_13015) | thiM | 2623990..2624790 (+) | 801 | WP_001108492.1 | hydroxyethylthiazole kinase | - |
| E3S84_RS13020 (E3S84_13020) | thiE | 2624783..2625424 (+) | 642 | WP_000483155.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=417616 E3S84_RS12995 WP_000932694.1 2620492..2620887(+) (ssb) [Staphylococcus aureus strain UP_644]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=417616 E3S84_RS12995 WP_000932694.1 2620492..2620887(+) (ssb) [Staphylococcus aureus strain UP_644]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |