Detailed information NTG0041760

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: PSTAB_RS19600
• Genome accession: NC_015740
• Coordinates: 4261924..4263192 (-)
• Length: 422 a.a.
• NCBI ID: WP_041772016.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4256924..4268192

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PSTAB_RS19585 (PSTAB_3945)	rpoH	4259274..4260128 (-)	855	WP_011914994.1	RNA polymerase sigma factor RpoH	-
PSTAB_RS19590 (PSTAB_3946)	ftsX	4260240..4261259 (-)	1020	WP_011914995.1	permease-like cell division protein FtsX	-
PSTAB_RS19595 (PSTAB_3947)	ftsE	4261259..4261927 (-)	669	WP_011914996.1	cell division ATP-binding protein FtsE	-
PSTAB_RS19600 (PSTAB_3948)	pilA	4261924..4263192 (-)	1269	WP_041772016.1	signal recognition particle-docking protein FtsY	Machinery gene
PSTAB_RS19605 (PSTAB_3949)	-	4263420..4264772 (+)	1353	WP_013984341.1	M16 family metallopeptidase	-
PSTAB_RS19610 (PSTAB_3950)	-	4264765..4266306 (+)	1542	WP_013984342.1	M16 family metallopeptidase	-
PSTAB_RS19615 (PSTAB_3951)	rsmD	4266306..4266908 (+)	603	WP_013984343.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
PSTAB_RS19620 (PSTAB_3952)	-	4266920..4267324 (-)	405	WP_013984344.1	hypothetical protein	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 45004.26 Da
• Isoelectric Point: 4.6931

>NTDB_id=41760 PSTAB_RS19600 WP_041772016.1 4261924..4263192(-) (pilA) [Stutzerimonas stutzeri]
MFGSNDDKKTPAEPGEKKGLFGWLRKKPQPASAEQPATEPQADSEPVEQTVANVETPAATPQHEEPRAVEADLQPTEVIE
SPLPEPVPEPEPEPEPEPLSAPVVAATPEAPAKLGFFARLRQGLSKTSASIGEGMASLFLGKKAIDDDLLDELETRLLTA
DVGVEATTAIMQNLTRRVSRKELADSGALYTALQEELVGLLKPVEQPLAIDAGKRPYVILVVGVNGVGKTTTIGKLAKKL
QLDGKKVMLAAGDTFRAAAVEQLQVWGERNGIPVIAQHTGADSASVIFDAVQAAKARGIDVLIADTAGRLHTKDNLMEEL
KKVRRVMGKLDESAPHEVLLVLDAGTGQNAINQTRQFNQAVELTGLALTKLDGTAKGGVIFALAKQFGTPIRYIGVGEGI
DDLRTFEADAFVKALFAQREDA

Nucleotide

• Length: 1269 bp

>NTDB_id=41760 PSTAB_RS19600 WP_041772016.1 4261924..4263192(-) (pilA) [Stutzerimonas stutzeri]
ATGTTTGGTTCCAACGACGACAAGAAGACGCCGGCCGAGCCCGGCGAGAAGAAAGGCCTGTTCGGCTGGCTGCGCAAGAA
GCCCCAGCCCGCTTCGGCAGAGCAGCCGGCCACCGAGCCTCAAGCGGACAGCGAACCGGTCGAGCAGACCGTGGCGAATG
TCGAAACGCCTGCCGCCACGCCGCAGCACGAGGAGCCTCGCGCCGTCGAGGCCGATCTGCAGCCGACCGAGGTGATCGAG
TCGCCGCTGCCAGAGCCTGTACCCGAACCCGAACCCGAACCCGAACCCGAGCCGTTATCTGCCCCGGTCGTTGCGGCCAC
GCCGGAAGCGCCGGCCAAGCTCGGCTTCTTCGCTCGCCTGCGCCAGGGTCTGTCGAAGACCAGCGCCAGCATAGGCGAAG
GCATGGCCAGCCTGTTCCTCGGCAAGAAGGCCATCGACGACGATCTGCTCGACGAACTGGAAACCCGCCTGCTGACCGCC
GACGTCGGCGTCGAGGCGACCACCGCGATCATGCAGAACCTCACCCGGCGCGTCTCGCGCAAGGAGCTGGCCGACAGCGG
CGCGCTCTACACCGCGCTGCAGGAGGAGCTCGTCGGTCTGCTCAAGCCGGTCGAGCAGCCGCTGGCGATCGATGCCGGCA
AGCGTCCCTACGTGATCCTGGTGGTCGGCGTGAACGGCGTCGGCAAGACCACCACCATCGGCAAGCTGGCCAAGAAACTG
CAACTCGACGGCAAGAAGGTCATGCTCGCCGCCGGTGACACCTTCCGCGCCGCAGCGGTGGAGCAGCTGCAGGTGTGGGG
CGAGCGCAACGGCATCCCGGTGATCGCCCAGCACACCGGCGCGGATTCCGCCTCGGTGATCTTCGATGCCGTGCAGGCCG
CCAAGGCACGCGGCATCGACGTGCTGATCGCCGACACCGCCGGCCGACTGCACACCAAGGACAACCTGATGGAAGAGCTG
AAGAAGGTCCGCCGGGTGATGGGCAAGCTCGACGAGTCGGCGCCACATGAGGTGCTGCTGGTGCTCGATGCCGGCACCGG
ACAGAACGCCATCAACCAGACCCGCCAGTTCAACCAGGCGGTCGAGCTGACCGGGCTTGCGCTGACCAAGCTCGACGGCA
CCGCCAAGGGCGGCGTGATCTTCGCCCTGGCCAAGCAGTTCGGCACGCCGATCCGCTACATCGGCGTAGGCGAAGGCATC
GACGATCTGCGCACCTTCGAGGCCGATGCCTTCGTCAAGGCGCTGTTCGCTCAGCGGGAAGACGCATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (217-416)

• SRP54-type protein, helical bundle domain (SRP54_N) (132-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	49.761	99.052	0.493